Cluster: MGYG000004188_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004188
- CGC Family ID: CGCFAM_06481
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004188_1 | MGYG000004188_1_240 | 324474 | 327608 | + | 1.B.14.6.1 |
| pfam | MGYG000004188_1 | MGYG000004188_1_241 | 327642 | 329444 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000004188_1 | MGYG000004188_1_242 | 329495 | 332494 | + | 1.B.14.6.1 |
| pfam | MGYG000004188_1 | MGYG000004188_1_243 | 332506 | 334185 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_244 | 334366 | 336756 | + | PL8_2 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_245 | 336879 | 339089 | + | PL8_3 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_246 | 339146 | 341617 | + | PL30 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_247 | 341626 | 343701 | + | GH20 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_248 | 343731 | 346205 | + | GH95 |
| pfam | MGYG000004188_1 | MGYG000004188_1_249 | 346532 | 347476 | + | Dus |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_250 | 347560 | 351159 | - | GH2 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_251 | 351181 | 352998 | - | CBM32 | GH29 |
Gene ID: MGYG000004188_1_240
Type: TC
Location: 324474 - 327608 (+)
Type: TC
Location: 324474 - 327608 (+)
Gene ID: MGYG000004188_1_241
Type: pfam
Location: 327642 - 329444 (+)
Type: pfam
Location: 327642 - 329444 (+)
Gene ID: MGYG000004188_1_242
Type: TC
Location: 329495 - 332494 (+)
Type: TC
Location: 329495 - 332494 (+)
Gene ID: MGYG000004188_1_243
Type: pfam
Location: 332506 - 334185 (+)
Type: pfam
Location: 332506 - 334185 (+)
Gene ID: MGYG000004188_1_244
Type: CAZyme
Location: 334366 - 336756 (+)
Type: CAZyme
Location: 334366 - 336756 (+)
Gene ID: MGYG000004188_1_245
Type: CAZyme
Location: 336879 - 339089 (+)
Type: CAZyme
Location: 336879 - 339089 (+)
Gene ID: MGYG000004188_1_246
Type: CAZyme
Location: 339146 - 341617 (+)
Type: CAZyme
Location: 339146 - 341617 (+)
Gene ID: MGYG000004188_1_247
Type: CAZyme
Location: 341626 - 343701 (+)
Type: CAZyme
Location: 341626 - 343701 (+)
Gene ID: MGYG000004188_1_248
Type: CAZyme
Location: 343731 - 346205 (+)
Type: CAZyme
Location: 343731 - 346205 (+)
Gene ID: MGYG000004188_1_249
Type: pfam
Location: 346532 - 347476 (+)
Type: pfam
Location: 346532 - 347476 (+)
Gene ID: MGYG000004188_1_250
Type: CAZyme
Location: 347560 - 351159 (-)
Type: CAZyme
Location: 347560 - 351159 (-)
Gene ID: MGYG000004188_1_251
Type: CAZyme
Location: 351181 - 352998 (-)
Type: CAZyme
Location: 351181 - 352998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902493215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.