Cluster: MGYG000004188_CGC6
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 10
- Substrate:
- Genome ID: MGYG000004188
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004188_1 | MGYG000004188_1_175 | 229116 | 231299 | - | PL8_3 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_176 | 231364 | 232527 | - | PL38 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_177 | 232555 | 234762 | - | PL8_3 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_178 | 234746 | 237418 | - | PL40 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_179 | 237439 | 239580 | - | PL29 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_180 | 239671 | 241404 | - | GH10 |
| pfam | MGYG000004188_1 | MGYG000004188_1_181 | 241424 | 242467 | - | BT_3987-like_N | DUF5627 |
| pfam | MGYG000004188_1 | MGYG000004188_1_182 | 242494 | 244287 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004188_1 | MGYG000004188_1_183 | 244307 | 247138 | - | 1.B.14.6.1 |
| pfam | MGYG000004188_1 | MGYG000004188_1_184 | 247165 | 249129 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004188_1 | MGYG000004188_1_185 | 249144 | 252311 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000004188_1 | MGYG000004188_1_186 | 252673 | 254229 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_187 | 254454 | 256859 | - | GH2 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_188 | 256903 | 258831 | - | PL38 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_189 | 259095 | 260255 | - | GH105 |
| TF | MGYG000004188_1 | MGYG000004188_1_190 | 260391 | 264488 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000004188_1 | MGYG000004188_1_191 | 264787 | 265968 | - | 9.B.169.1.11 |
| CAZyme | MGYG000004188_1 | MGYG000004188_1_192 | 265995 | 268334 | - | GH3 |
Gene ID: MGYG000004188_1_175
Type: CAZyme
Location: 229116 - 231299 (-)
Type: CAZyme
Location: 229116 - 231299 (-)
Gene ID: MGYG000004188_1_176
Type: CAZyme
Location: 231364 - 232527 (-)
Type: CAZyme
Location: 231364 - 232527 (-)
Gene ID: MGYG000004188_1_177
Type: CAZyme
Location: 232555 - 234762 (-)
Type: CAZyme
Location: 232555 - 234762 (-)
Gene ID: MGYG000004188_1_178
Type: CAZyme
Location: 234746 - 237418 (-)
Type: CAZyme
Location: 234746 - 237418 (-)
Gene ID: MGYG000004188_1_179
Type: CAZyme
Location: 237439 - 239580 (-)
Type: CAZyme
Location: 237439 - 239580 (-)
Gene ID: MGYG000004188_1_180
Type: CAZyme
Location: 239671 - 241404 (-)
Type: CAZyme
Location: 239671 - 241404 (-)
Gene ID: MGYG000004188_1_181
Type: pfam
Location: 241424 - 242467 (-)
Type: pfam
Location: 241424 - 242467 (-)
Gene ID: MGYG000004188_1_182
Type: pfam
Location: 242494 - 244287 (-)
Type: pfam
Location: 242494 - 244287 (-)
Gene ID: MGYG000004188_1_183
Type: TC
Location: 244307 - 247138 (-)
Type: TC
Location: 244307 - 247138 (-)
Gene ID: MGYG000004188_1_184
Type: pfam
Location: 247165 - 249129 (-)
Type: pfam
Location: 247165 - 249129 (-)
Gene ID: MGYG000004188_1_185
Type: TC
Location: 249144 - 252311 (-)
Type: TC
Location: 249144 - 252311 (-)
Gene ID: MGYG000004188_1_186
Type:
Location: 252673 - 254229 (-)
Type:
Location: 252673 - 254229 (-)
Gene ID: MGYG000004188_1_187
Type: CAZyme
Location: 254454 - 256859 (-)
Type: CAZyme
Location: 254454 - 256859 (-)
Gene ID: MGYG000004188_1_188
Type: CAZyme
Location: 256903 - 258831 (-)
Type: CAZyme
Location: 256903 - 258831 (-)
Gene ID: MGYG000004188_1_189
Type: CAZyme
Location: 259095 - 260255 (-)
Type: CAZyme
Location: 259095 - 260255 (-)
Gene ID: MGYG000004188_1_190
Type: TF
Location: 260391 - 264488 (-)
Type: TF
Location: 260391 - 264488 (-)
Gene ID: MGYG000004188_1_191
Type: TC
Location: 264787 - 265968 (-)
Type: TC
Location: 264787 - 265968 (-)
Gene ID: MGYG000004188_1_192
Type: CAZyme
Location: 265995 - 268334 (-)
Type: CAZyme
Location: 265995 - 268334 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902493215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.