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Cluster: MGYG000004188_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004188_27 MGYG000004188_27_10 9593 10621 - 3.A.1.13.2
TC MGYG000004188_27 MGYG000004188_27_11 10623 11765 - 3.A.1.13.2
pfam MGYG000004188_27 MGYG000004188_27_12 11783 12859 - DUF5074
pfam MGYG000004188_27 MGYG000004188_27_13 12874 14853 - TonB_dep_Rec_b-barrel | Plug | OMP_b-brl_3
TC MGYG000004188_27 MGYG000004188_27_14 15211 16230 + 1.A.35.3.2
TC MGYG000004188_27 MGYG000004188_27_15 16282 17805 - 2.A.17.1.6
pfam MGYG000004188_27 MGYG000004188_27_16 17880 18356 - tRNA_edit
pfam MGYG000004188_27 MGYG000004188_27_17 18936 21773 - UvrA_DNA-bind | UvrA_inter
CAZyme MGYG000004188_27 MGYG000004188_27_18 21965 23767 + CBM50 | CBM50 | CBM50
Gene ID: MGYG000004188_27_10
Type: TC
Location: 9593 - 10621 (-)
Gene ID: MGYG000004188_27_11
Type: TC
Location: 10623 - 11765 (-)
Gene ID: MGYG000004188_27_12
Type: pfam
Location: 11783 - 12859 (-)
Gene ID: MGYG000004188_27_13
Type: pfam
Location: 12874 - 14853 (-)
Gene ID: MGYG000004188_27_14
Type: TC
Location: 15211 - 16230 (+)
Gene ID: MGYG000004188_27_15
Type: TC
Location: 16282 - 17805 (-)
Gene ID: MGYG000004188_27_16
Type: pfam
Location: 17880 - 18356 (-)
Gene ID: MGYG000004188_27_17
Type: pfam
Location: 18936 - 21773 (-)
Gene ID: MGYG000004188_27_18
Type: CAZyme
Location: 21965 - 23767 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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