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Cluster: MGYG000004188_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004188_22 MGYG000004188_22_3 2424 3659 + 3.B.1.1.5
CAZyme MGYG000004188_22 MGYG000004188_22_4 3858 6167 - GH65
TC MGYG000004188_22 MGYG000004188_22_5 6218 7582 - 2.A.2.6.2
TF MGYG000004188_22 MGYG000004188_22_6 7618 8622 - LacI
CAZyme MGYG000004188_22 MGYG000004188_22_7 9096 10298 + GH53
CAZyme MGYG000004188_22 MGYG000004188_22_8 10306 12783 + GH2
TC MGYG000004188_22 MGYG000004188_22_9 13106 16177 + 1.B.14.6.1
TC MGYG000004188_22 MGYG000004188_22_10 16198 17817 + 8.A.46.1.1
pfam MGYG000004188_22 MGYG000004188_22_11 17838 19034 + SusE
pfam MGYG000004188_22 MGYG000004188_22_12 19106 20134 + SusF_N
CAZyme MGYG000004188_22 MGYG000004188_22_13 20298 22352 + GH13_36
Gene ID: MGYG000004188_22_3
Type: TC
Location: 2424 - 3659 (+)
Gene ID: MGYG000004188_22_4
Type: CAZyme
Location: 3858 - 6167 (-)
Gene ID: MGYG000004188_22_5
Type: TC
Location: 6218 - 7582 (-)
Gene ID: MGYG000004188_22_6
Type: TF
Location: 7618 - 8622 (-)
Gene ID: MGYG000004188_22_7
Type: CAZyme
Location: 9096 - 10298 (+)
Gene ID: MGYG000004188_22_8
Type: CAZyme
Location: 10306 - 12783 (+)
Gene ID: MGYG000004188_22_9
Type: TC
Location: 13106 - 16177 (+)
Gene ID: MGYG000004188_22_10
Type: TC
Location: 16198 - 17817 (+)
Gene ID: MGYG000004188_22_11
Type: pfam
Location: 17838 - 19034 (+)
Gene ID: MGYG000004188_22_12
Type: pfam
Location: 19106 - 20134 (+)
Gene ID: MGYG000004188_22_13
Type: CAZyme
Location: 20298 - 22352 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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