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Cluster: MGYG000004188_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004188_20 MGYG000004188_20_11 18164 18742 - 3.D.6.1.2
TC MGYG000004188_20 MGYG000004188_20_12 18775 19338 - 3.D.6.1.2
TC MGYG000004188_20 MGYG000004188_20_13 19377 20003 - 3.D.6.1.3
TC MGYG000004188_20 MGYG000004188_20_14 20030 21022 - 3.D.6.1.2
TC MGYG000004188_20 MGYG000004188_20_15 21052 22389 - 3.D.6.1.2
TC MGYG000004188_20 MGYG000004188_20_16 22428 23351 - 3.D.6.1.2
pfam MGYG000004188_20 MGYG000004188_20_17 23386 23808 - RseC_MucC
TC MGYG000004188_20 MGYG000004188_20_18 24062 25717 - 9.B.168.1.2
peptidase MGYG000004188_20 MGYG000004188_20_19 25878 27515 + C26.964
TC MGYG000004188_20 MGYG000004188_20_20 27556 29406 + 2.A.9.3.1
TC MGYG000004188_20 MGYG000004188_20_21 29549 30892 + 2.A.66.1.45
NULL(UNKNOWN) MGYG000004188_20 MGYG000004188_20_22 31209 31385 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004188_20 MGYG000004188_20_23 31467 32279 + Patatin
CAZyme MGYG000004188_20 MGYG000004188_20_24 32320 34020 + GH13_38
Gene ID: MGYG000004188_20_11
Type: TC
Location: 18164 - 18742 (-)
Gene ID: MGYG000004188_20_12
Type: TC
Location: 18775 - 19338 (-)
Gene ID: MGYG000004188_20_13
Type: TC
Location: 19377 - 20003 (-)
Gene ID: MGYG000004188_20_14
Type: TC
Location: 20030 - 21022 (-)
Gene ID: MGYG000004188_20_15
Type: TC
Location: 21052 - 22389 (-)
Gene ID: MGYG000004188_20_16
Type: TC
Location: 22428 - 23351 (-)
Gene ID: MGYG000004188_20_17
Type: pfam
Location: 23386 - 23808 (-)
Gene ID: MGYG000004188_20_18
Type: TC
Location: 24062 - 25717 (-)
Gene ID: MGYG000004188_20_19
Type: peptidase
Location: 25878 - 27515 (+)
Gene ID: MGYG000004188_20_20
Type: TC
Location: 27556 - 29406 (+)
Gene ID: MGYG000004188_20_21
Type: TC
Location: 29549 - 30892 (+)
Gene ID: MGYG000004188_20_22
Type:
Location: 31209 - 31385 (-)
Gene ID: MGYG000004188_20_23
Type: pfam
Location: 31467 - 32279 (+)
Gene ID: MGYG000004188_20_24
Type: CAZyme
Location: 32320 - 34020 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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