dbCAN Logo

Cluster: MGYG000004188_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004188_2 MGYG000004188_2_189 229658 230314 + 4.F.1.3.2
pfam MGYG000004188_2 MGYG000004188_2_190 230314 231246 + PAP2_3
TF MGYG000004188_2 MGYG000004188_2_191 231256 235332 - HTH_AraC
TC MGYG000004188_2 MGYG000004188_2_192 236076 239243 + 1.B.14.6.1
pfam MGYG000004188_2 MGYG000004188_2_193 239268 241286 + SusD_RagB | SusD-like_3
CAZyme MGYG000004188_2 MGYG000004188_2_194 241419 242801 + GH29
sulfatase MGYG000004188_2 MGYG000004188_2_195 242847 244406 + S1_16
CAZyme MGYG000004188_2 MGYG000004188_2_196 244587 247445 - CBM32
pfam MGYG000004188_2 MGYG000004188_2_197 247651 249018 - F5_F8_type_C | BT_3987-like_N | BT_3987-like_N
pfam MGYG000004188_2 MGYG000004188_2_198 249052 250962 - SusD_RagB | SusD-like_3
TC MGYG000004188_2 MGYG000004188_2_199 250984 254178 - 1.B.14.6.1
Gene ID: MGYG000004188_2_189
Type: TC
Location: 229658 - 230314 (+)
Gene ID: MGYG000004188_2_190
Type: pfam
Location: 230314 - 231246 (+)
Gene ID: MGYG000004188_2_191
Type: TF
Location: 231256 - 235332 (-)
Gene ID: MGYG000004188_2_192
Type: TC
Location: 236076 - 239243 (+)
Gene ID: MGYG000004188_2_193
Type: pfam
Location: 239268 - 241286 (+)
Gene ID: MGYG000004188_2_194
Type: CAZyme
Location: 241419 - 242801 (+)
Gene ID: MGYG000004188_2_195
Type: sulfatase
Location: 242847 - 244406 (+)
Gene ID: MGYG000004188_2_196
Type: CAZyme
Location: 244587 - 247445 (-)
Gene ID: MGYG000004188_2_197
Type: pfam
Location: 247651 - 249018 (-)
Gene ID: MGYG000004188_2_198
Type: pfam
Location: 249052 - 250962 (-)
Gene ID: MGYG000004188_2_199
Type: TC
Location: 250984 - 254178 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004188_2_194 vegetarian > vegan 1.22136 0.03556

🧭 Explore Read Mapping of CGC

← Back to Cluster List