Cluster: MGYG000004188_CGC13
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004188
- CGC Family ID: CGCFAM_09202
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004188_2 | MGYG000004188_2_189 | 229658 | 230314 | + | 4.F.1.3.2 |
| pfam | MGYG000004188_2 | MGYG000004188_2_190 | 230314 | 231246 | + | PAP2_3 |
| TF | MGYG000004188_2 | MGYG000004188_2_191 | 231256 | 235332 | - | HTH_AraC |
| TC | MGYG000004188_2 | MGYG000004188_2_192 | 236076 | 239243 | + | 1.B.14.6.1 |
| pfam | MGYG000004188_2 | MGYG000004188_2_193 | 239268 | 241286 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000004188_2 | MGYG000004188_2_194 | 241419 | 242801 | + | GH29 |
| sulfatase | MGYG000004188_2 | MGYG000004188_2_195 | 242847 | 244406 | + | S1_16 |
| CAZyme | MGYG000004188_2 | MGYG000004188_2_196 | 244587 | 247445 | - | CBM32 |
| pfam | MGYG000004188_2 | MGYG000004188_2_197 | 247651 | 249018 | - | F5_F8_type_C | BT_3987-like_N | BT_3987-like_N |
| pfam | MGYG000004188_2 | MGYG000004188_2_198 | 249052 | 250962 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004188_2 | MGYG000004188_2_199 | 250984 | 254178 | - | 1.B.14.6.1 |
Gene ID: MGYG000004188_2_189
Type: TC
Location: 229658 - 230314 (+)
Type: TC
Location: 229658 - 230314 (+)
Gene ID: MGYG000004188_2_190
Type: pfam
Location: 230314 - 231246 (+)
Type: pfam
Location: 230314 - 231246 (+)
Gene ID: MGYG000004188_2_191
Type: TF
Location: 231256 - 235332 (-)
Type: TF
Location: 231256 - 235332 (-)
Gene ID: MGYG000004188_2_192
Type: TC
Location: 236076 - 239243 (+)
Type: TC
Location: 236076 - 239243 (+)
Gene ID: MGYG000004188_2_193
Type: pfam
Location: 239268 - 241286 (+)
Type: pfam
Location: 239268 - 241286 (+)
Gene ID: MGYG000004188_2_194
Type: CAZyme
Location: 241419 - 242801 (+)
Type: CAZyme
Location: 241419 - 242801 (+)
Gene ID: MGYG000004188_2_195
Type: sulfatase
Location: 242847 - 244406 (+)
Type: sulfatase
Location: 242847 - 244406 (+)
Gene ID: MGYG000004188_2_196
Type: CAZyme
Location: 244587 - 247445 (-)
Type: CAZyme
Location: 244587 - 247445 (-)
Gene ID: MGYG000004188_2_197
Type: pfam
Location: 247651 - 249018 (-)
Type: pfam
Location: 247651 - 249018 (-)
Gene ID: MGYG000004188_2_198
Type: pfam
Location: 249052 - 250962 (-)
Type: pfam
Location: 249052 - 250962 (-)
Gene ID: MGYG000004188_2_199
Type: TC
Location: 250984 - 254178 (-)
Type: TC
Location: 250984 - 254178 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902493215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004188_2_194 | vegetarian > vegan | 1.22136 | 0.03556 |