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Cluster: MGYG000004188_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004188_1 MGYG000004188_1_19 19807 20649 - 1.A.23.2.1
pfam MGYG000004188_1 MGYG000004188_1_20 20845 22143 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
pfam MGYG000004188_1 MGYG000004188_1_21 22138 22566 - VanZ
TC MGYG000004188_1 MGYG000004188_1_22 22628 23995 + 2.A.22.5.3
pfam MGYG000004188_1 MGYG000004188_1_23 24008 24961 + HHH_3 | HHH_3 | HHH_3
TC MGYG000004188_1 MGYG000004188_1_24 25364 26035 - 3.A.1.122.2
pfam MGYG000004188_1 MGYG000004188_1_25 26053 26763 - ThiF
TC MGYG000004188_1 MGYG000004188_1_26 26763 28895 - 2.A.37.2.5
pfam MGYG000004188_1 MGYG000004188_1_27 29181 30188 + Semialdhyde_dh | Semialdhyde_dhC
NULL(UNKNOWN) MGYG000004188_1 MGYG000004188_1_28 30347 31195 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004188_1 MGYG000004188_1_29 31705 35043 + 1.B.14.6.1
pfam MGYG000004188_1 MGYG000004188_1_30 35064 36962 + SusD_RagB | SusD-like_3
CAZyme MGYG000004188_1 MGYG000004188_1_31 37156 38328 + GH171
TC MGYG000004188_1 MGYG000004188_1_32 38434 39903 + 2.A.21.3.7
NULL(UNKNOWN) MGYG000004188_1 MGYG000004188_1_33 39923 42994 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004188_1 MGYG000004188_1_34 42999 44879 + Metallophos | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
CAZyme MGYG000004188_1 MGYG000004188_1_35 44902 46374 + GT2
Gene ID: MGYG000004188_1_19
Type: TC
Location: 19807 - 20649 (-)
Gene ID: MGYG000004188_1_20
Type: pfam
Location: 20845 - 22143 (+)
Gene ID: MGYG000004188_1_21
Type: pfam
Location: 22138 - 22566 (-)
Gene ID: MGYG000004188_1_22
Type: TC
Location: 22628 - 23995 (+)
Gene ID: MGYG000004188_1_23
Type: pfam
Location: 24008 - 24961 (+)
Gene ID: MGYG000004188_1_24
Type: TC
Location: 25364 - 26035 (-)
Gene ID: MGYG000004188_1_25
Type: pfam
Location: 26053 - 26763 (-)
Gene ID: MGYG000004188_1_26
Type: TC
Location: 26763 - 28895 (-)
Gene ID: MGYG000004188_1_27
Type: pfam
Location: 29181 - 30188 (+)
Gene ID: MGYG000004188_1_28
Type:
Location: 30347 - 31195 (+)
Gene ID: MGYG000004188_1_29
Type: TC
Location: 31705 - 35043 (+)
Gene ID: MGYG000004188_1_30
Type: pfam
Location: 35064 - 36962 (+)
Gene ID: MGYG000004188_1_31
Type: CAZyme
Location: 37156 - 38328 (+)
Gene ID: MGYG000004188_1_32
Type: TC
Location: 38434 - 39903 (+)
Gene ID: MGYG000004188_1_33
Type:
Location: 39923 - 42994 (+)
Gene ID: MGYG000004188_1_34
Type: pfam
Location: 42999 - 44879 (+)
Gene ID: MGYG000004188_1_35
Type: CAZyme
Location: 44902 - 46374 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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