Cluster: MGYG000004183_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004183
- CGC Family ID: CGCFAM_00553
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004183_71 | MGYG000004183_71_2 | 917 | 1444 | - | 3.D.1.8.1 |
| pfam | MGYG000004183_71 | MGYG000004183_71_3 | 1799 | 3019 | - | TRAM | tRNA_U5-meth_tr |
| pfam | MGYG000004183_71 | MGYG000004183_71_4 | 3281 | 3682 | - | GtrA_DPMS_TM |
| CAZyme | MGYG000004183_71 | MGYG000004183_71_5 | 4323 | 5087 | - | GT2 |
| CAZyme | MGYG000004183_71 | MGYG000004183_71_6 | 5436 | 6851 | + | GT28 |
| TC | MGYG000004183_71 | MGYG000004183_71_7 | 6888 | 8432 | + | 1.I.1.1.3 |
Gene ID: MGYG000004183_71_2
Type: TC
Location: 917 - 1444 (-)
Type: TC
Location: 917 - 1444 (-)
Gene ID: MGYG000004183_71_3
Type: pfam
Location: 1799 - 3019 (-)
Type: pfam
Location: 1799 - 3019 (-)
Gene ID: MGYG000004183_71_4
Type: pfam
Location: 3281 - 3682 (-)
Type: pfam
Location: 3281 - 3682 (-)
Gene ID: MGYG000004183_71_5
Type: CAZyme
Location: 4323 - 5087 (-)
Type: CAZyme
Location: 4323 - 5087 (-)
Gene ID: MGYG000004183_71_6
Type: CAZyme
Location: 5436 - 6851 (+)
Type: CAZyme
Location: 5436 - 6851 (+)
Gene ID: MGYG000004183_71_7
Type: TC
Location: 6888 - 8432 (+)
Type: TC
Location: 6888 - 8432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
CALADF01
Species
CALADF01 sp937890835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.