Cluster: MGYG000004180_CGC60
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004180
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004180_46 | MGYG000004180_46_8 | 15045 | 16247 | - | GH88 |
| CAZyme | MGYG000004180_46 | MGYG000004180_46_9 | 16282 | 18105 | - | PL35 |
| pfam | MGYG000004180_46 | MGYG000004180_46_10 | 18105 | 19841 | - | SusD_RagB | SusD-like | SusD-like_2 | SusD-like_3 |
| TC | MGYG000004180_46 | MGYG000004180_46_11 | 19854 | 23000 | - | 1.B.14.6.1 |
Gene ID: MGYG000004180_46_8
Type: CAZyme
Location: 15045 - 16247 (-)
Type: CAZyme
Location: 15045 - 16247 (-)
Gene ID: MGYG000004180_46_9
Type: CAZyme
Location: 16282 - 18105 (-)
Type: CAZyme
Location: 16282 - 18105 (-)
Gene ID: MGYG000004180_46_10
Type: pfam
Location: 18105 - 19841 (-)
Type: pfam
Location: 18105 - 19841 (-)
Gene ID: MGYG000004180_46_11
Type: TC
Location: 19854 - 23000 (-)
Type: TC
Location: 19854 - 23000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp902493135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004180_46_9 | vegan > omnivore | 1.26302 | 0.04425 |
| MGYG000004180_46_9 | vegetarian > omnivore | 1.78141 | 0.00180 |
| MGYG000004180_46_10 | vegetarian > omnivore | 2.18286 | 0.00180 |
| MGYG000004180_46_11 | vegetarian > omnivore | 1.59319 | 0.00180 |