Cluster: MGYG000004180_CGC54
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004180
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004180_37 | MGYG000004180_37_18 | 24756 | 27413 | + | PL40 |
| CAZyme | MGYG000004180_37 | MGYG000004180_37_19 | 27447 | 30644 | + | PL8_3 |
| CAZyme | MGYG000004180_37 | MGYG000004180_37_20 | 30661 | 32520 | + | PL35 |
| CAZyme | MGYG000004180_37 | MGYG000004180_37_21 | 32523 | 33722 | + | GH88 |
| TF | MGYG000004180_37 | MGYG000004180_37_22 | 33917 | 34465 | + | GerE |
| STP | MGYG000004180_37 | MGYG000004180_37_23 | 34542 | 35480 | + | FecR |
| TC | MGYG000004180_37 | MGYG000004180_37_24 | 35682 | 39197 | + | 1.B.14.6.1 |
| pfam | MGYG000004180_37 | MGYG000004180_37_25 | 39224 | 40933 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000004180_37 | MGYG000004180_37_26 | 40952 | 42169 | + | Glyco_tran_WbsX |
| CAZyme | MGYG000004180_37 | MGYG000004180_37_27 | 42503 | 44101 | + | GH20 |
Gene ID: MGYG000004180_37_18
Type: CAZyme
Location: 24756 - 27413 (+)
Type: CAZyme
Location: 24756 - 27413 (+)
Gene ID: MGYG000004180_37_19
Type: CAZyme
Location: 27447 - 30644 (+)
Type: CAZyme
Location: 27447 - 30644 (+)
Gene ID: MGYG000004180_37_20
Type: CAZyme
Location: 30661 - 32520 (+)
Type: CAZyme
Location: 30661 - 32520 (+)
Gene ID: MGYG000004180_37_21
Type: CAZyme
Location: 32523 - 33722 (+)
Type: CAZyme
Location: 32523 - 33722 (+)
Gene ID: MGYG000004180_37_22
Type: TF
Location: 33917 - 34465 (+)
Type: TF
Location: 33917 - 34465 (+)
Gene ID: MGYG000004180_37_23
Type: STP
Location: 34542 - 35480 (+)
Type: STP
Location: 34542 - 35480 (+)
Gene ID: MGYG000004180_37_24
Type: TC
Location: 35682 - 39197 (+)
Type: TC
Location: 35682 - 39197 (+)
Gene ID: MGYG000004180_37_25
Type: pfam
Location: 39224 - 40933 (+)
Type: pfam
Location: 39224 - 40933 (+)
Gene ID: MGYG000004180_37_26
Type: pfam
Location: 40952 - 42169 (+)
Type: pfam
Location: 40952 - 42169 (+)
Gene ID: MGYG000004180_37_27
Type: CAZyme
Location: 42503 - 44101 (+)
Type: CAZyme
Location: 42503 - 44101 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp902493135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004180_37_23 | vegetarian > omnivore | 2.00473 | 0.00180 |
| MGYG000004180_37_23 | vegetarian > vegan | 1.13959 | 0.00226 |
| MGYG000004180_37_24 | vegetarian > omnivore | 1.77827 | 0.00180 |
| MGYG000004180_37_24 | vegetarian > vegan | 1.39990 | 0.00226 |
| MGYG000004180_37_25 | vegetarian > omnivore | 2.07064 | 0.00180 |
| MGYG000004180_37_25 | vegetarian > vegan | 1.15486 | 0.00226 |
| MGYG000004180_37_26 | vegetarian > omnivore | 1.73532 | 0.00180 |
| MGYG000004180_37_26 | vegetarian > vegan | 1.39386 | 0.00226 |