Cluster: MGYG000004180_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004180
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004180_24 | MGYG000004180_24_11 | 17193 | 20558 | + | 1.B.14.6.1 |
| pfam | MGYG000004180_24 | MGYG000004180_24_12 | 20579 | 22051 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000004180_24 | MGYG000004180_24_13 | 22221 | 24989 | + | GH2 |
| TC | MGYG000004180_24 | MGYG000004180_24_14 | 25269 | 28469 | + | 1.B.14.6.1 |
| TC | MGYG000004180_24 | MGYG000004180_24_15 | 28484 | 29968 | + | 8.A.46.1.3 |
| CAZyme | MGYG000004180_24 | MGYG000004180_24_16 | 30148 | 32433 | + | GH92 |
Gene ID: MGYG000004180_24_11
Type: TC
Location: 17193 - 20558 (+)
Type: TC
Location: 17193 - 20558 (+)
Gene ID: MGYG000004180_24_12
Type: pfam
Location: 20579 - 22051 (+)
Type: pfam
Location: 20579 - 22051 (+)
Gene ID: MGYG000004180_24_13
Type: CAZyme
Location: 22221 - 24989 (+)
Type: CAZyme
Location: 22221 - 24989 (+)
Gene ID: MGYG000004180_24_14
Type: TC
Location: 25269 - 28469 (+)
Type: TC
Location: 25269 - 28469 (+)
Gene ID: MGYG000004180_24_15
Type: TC
Location: 28484 - 29968 (+)
Type: TC
Location: 28484 - 29968 (+)
Gene ID: MGYG000004180_24_16
Type: CAZyme
Location: 30148 - 32433 (+)
Type: CAZyme
Location: 30148 - 32433 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp902493135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004180_24_11 | vegetarian > vegan | 1.77005 | 0.00226 |
| MGYG000004180_24_12 | vegetarian > omnivore | 1.31457 | 0.00180 |
| MGYG000004180_24_12 | vegetarian > vegan | 1.51215 | 0.00226 |