Cluster: MGYG000004180_CGC20
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000004180
- CGC Family ID: CGCFAM_04479
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004180_10 | MGYG000004180_10_78 | 91503 | 92696 | - | GT2 |
| pfam | MGYG000004180_10 | MGYG000004180_10_79 | 92986 | 93924 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | MGYG000004180_10 | MGYG000004180_10_80 | 93935 | 95119 | + | GT2 |
| pfam | MGYG000004180_10 | MGYG000004180_10_81 | 95121 | 96905 | + | Asn_synthase |
| CAZyme | MGYG000004180_10 | MGYG000004180_10_82 | 96932 | 97969 | + | GT2 |
| CAZyme | MGYG000004180_10 | MGYG000004180_10_83 | 97951 | 99024 | + | GT2 |
| CAZyme | MGYG000004180_10 | MGYG000004180_10_84 | 99021 | 99893 | + | GT2 |
| TC | MGYG000004180_10 | MGYG000004180_10_85 | 99895 | 101427 | + | 2.A.66.1.40 |
| pfam | MGYG000004180_10 | MGYG000004180_10_86 | 101419 | 102456 | - | Acyl_transf_3 |
| STP | MGYG000004180_10 | MGYG000004180_10_87 | 102474 | 103409 | - | Pribosyltran |
| CAZyme | MGYG000004180_10 | MGYG000004180_10_88 | 103406 | 104611 | - | GT4 |
| CAZyme | MGYG000004180_10 | MGYG000004180_10_89 | 104619 | 105743 | - | GT4 |
| CAZyme | MGYG000004180_10 | MGYG000004180_10_90 | 105761 | 106990 | - | GT2 |
Gene ID: MGYG000004180_10_78
Type: CAZyme
Location: 91503 - 92696 (-)
Type: CAZyme
Location: 91503 - 92696 (-)
Gene ID: MGYG000004180_10_79
Type: pfam
Location: 92986 - 93924 (+)
Type: pfam
Location: 92986 - 93924 (+)
Gene ID: MGYG000004180_10_80
Type: CAZyme
Location: 93935 - 95119 (+)
Type: CAZyme
Location: 93935 - 95119 (+)
Gene ID: MGYG000004180_10_81
Type: pfam
Location: 95121 - 96905 (+)
Type: pfam
Location: 95121 - 96905 (+)
Gene ID: MGYG000004180_10_82
Type: CAZyme
Location: 96932 - 97969 (+)
Type: CAZyme
Location: 96932 - 97969 (+)
Gene ID: MGYG000004180_10_83
Type: CAZyme
Location: 97951 - 99024 (+)
Type: CAZyme
Location: 97951 - 99024 (+)
Gene ID: MGYG000004180_10_84
Type: CAZyme
Location: 99021 - 99893 (+)
Type: CAZyme
Location: 99021 - 99893 (+)
Gene ID: MGYG000004180_10_85
Type: TC
Location: 99895 - 101427 (+)
Type: TC
Location: 99895 - 101427 (+)
Gene ID: MGYG000004180_10_86
Type: pfam
Location: 101419 - 102456 (-)
Type: pfam
Location: 101419 - 102456 (-)
Gene ID: MGYG000004180_10_87
Type: STP
Location: 102474 - 103409 (-)
Type: STP
Location: 102474 - 103409 (-)
Gene ID: MGYG000004180_10_88
Type: CAZyme
Location: 103406 - 104611 (-)
Type: CAZyme
Location: 103406 - 104611 (-)
Gene ID: MGYG000004180_10_89
Type: CAZyme
Location: 104619 - 105743 (-)
Type: CAZyme
Location: 104619 - 105743 (-)
Gene ID: MGYG000004180_10_90
Type: CAZyme
Location: 105761 - 106990 (-)
Type: CAZyme
Location: 105761 - 106990 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp902493135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.