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Cluster: MGYG000004180_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004180_1 MGYG000004180_1_98 117799 118779 + GH43_34
STP MGYG000004180_1 MGYG000004180_1_99 118903 119547 + TetR_N
pfam MGYG000004180_1 MGYG000004180_1_100 119561 120880 + OEP | OEP
TC MGYG000004180_1 MGYG000004180_1_101 120899 121789 + 3.A.1.105.16
TC MGYG000004180_1 MGYG000004180_1_102 121804 122724 + 3.A.1.105.6
TC MGYG000004180_1 MGYG000004180_1_103 122779 123516 + 3.A.1.105.15
TC MGYG000004180_1 MGYG000004180_1_104 123533 124642 + 3.A.1.105.4
TC MGYG000004180_1 MGYG000004180_1_105 124642 125742 + 3.A.1.105.15
Gene ID: MGYG000004180_1_98
Type: CAZyme
Location: 117799 - 118779 (+)
Gene ID: MGYG000004180_1_99
Type: STP
Location: 118903 - 119547 (+)
Gene ID: MGYG000004180_1_100
Type: pfam
Location: 119561 - 120880 (+)
Gene ID: MGYG000004180_1_101
Type: TC
Location: 120899 - 121789 (+)
Gene ID: MGYG000004180_1_102
Type: TC
Location: 121804 - 122724 (+)
Gene ID: MGYG000004180_1_103
Type: TC
Location: 122779 - 123516 (+)
Gene ID: MGYG000004180_1_104
Type: TC
Location: 123533 - 124642 (+)
Gene ID: MGYG000004180_1_105
Type: TC
Location: 124642 - 125742 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004180_1_101 vegetarian > vegan 1.82028 0.00226

🧭 Explore Read Mapping of CGC

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