Cluster: MGYG000004172_CGC9
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004172
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004172_1 | MGYG000004172_1_197 | 261710 | 264517 | + | 1.B.14.10.2 |
| pfam | MGYG000004172_1 | MGYG000004172_1_198 | 264606 | 265163 | + | DUF3332 |
| peptidase | MGYG000004172_1 | MGYG000004172_1_199 | 265378 | 266595 | - | M20.003 |
| TC | MGYG000004172_1 | MGYG000004172_1_200 | 266600 | 268576 | - | 2.A.67.4.2 |
| pfam | MGYG000004172_1 | MGYG000004172_1_201 | 268725 | 269768 | + | AI-2E_transport |
| TC | MGYG000004172_1 | MGYG000004172_1_202 | 270111 | 273389 | + | 1.B.14.6.2 |
| TC | MGYG000004172_1 | MGYG000004172_1_203 | 273412 | 275271 | + | 8.A.46.1.3 |
| NULL(UNKNOWN) | MGYG000004172_1 | MGYG000004172_1_204 | 275290 | 277020 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004172_1 | MGYG000004172_1_205 | 277088 | 278470 | + | PL9 |
| CAZyme | MGYG000004172_1 | MGYG000004172_1_206 | 278481 | 279887 | + | PL9_1 |
| CAZyme | MGYG000004172_1 | MGYG000004172_1_207 | 279908 | 281350 | + | PL9 |
| CAZyme | MGYG000004172_1 | MGYG000004172_1_208 | 281428 | 282810 | + | GH105 |
| CAZyme | MGYG000004172_1 | MGYG000004172_1_209 | 282816 | 284843 | + | GH97 |
| TC | MGYG000004172_1 | MGYG000004172_1_210 | 284984 | 286414 | - | 2.A.2.3.6 |
| CAZyme | MGYG000004172_1 | MGYG000004172_1_211 | 286522 | 288834 | - | GH3 |
| pfam | MGYG000004172_1 | MGYG000004172_1_212 | 289021 | 289794 | - | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31 |
| TC | MGYG000004172_1 | MGYG000004172_1_213 | 290119 | 291318 | + | 1.A.23.4.5 |
Gene ID: MGYG000004172_1_197
Type: TC
Location: 261710 - 264517 (+)
Type: TC
Location: 261710 - 264517 (+)
Gene ID: MGYG000004172_1_198
Type: pfam
Location: 264606 - 265163 (+)
Type: pfam
Location: 264606 - 265163 (+)
Gene ID: MGYG000004172_1_199
Type: peptidase
Location: 265378 - 266595 (-)
Type: peptidase
Location: 265378 - 266595 (-)
Gene ID: MGYG000004172_1_200
Type: TC
Location: 266600 - 268576 (-)
Type: TC
Location: 266600 - 268576 (-)
Gene ID: MGYG000004172_1_201
Type: pfam
Location: 268725 - 269768 (+)
Type: pfam
Location: 268725 - 269768 (+)
Gene ID: MGYG000004172_1_202
Type: TC
Location: 270111 - 273389 (+)
Type: TC
Location: 270111 - 273389 (+)
Gene ID: MGYG000004172_1_203
Type: TC
Location: 273412 - 275271 (+)
Type: TC
Location: 273412 - 275271 (+)
Gene ID: MGYG000004172_1_204
Type:
Location: 275290 - 277020 (+)
Type:
Location: 275290 - 277020 (+)
Gene ID: MGYG000004172_1_205
Type: CAZyme
Location: 277088 - 278470 (+)
Type: CAZyme
Location: 277088 - 278470 (+)
Gene ID: MGYG000004172_1_206
Type: CAZyme
Location: 278481 - 279887 (+)
Type: CAZyme
Location: 278481 - 279887 (+)
Gene ID: MGYG000004172_1_207
Type: CAZyme
Location: 279908 - 281350 (+)
Type: CAZyme
Location: 279908 - 281350 (+)
Gene ID: MGYG000004172_1_208
Type: CAZyme
Location: 281428 - 282810 (+)
Type: CAZyme
Location: 281428 - 282810 (+)
Gene ID: MGYG000004172_1_209
Type: CAZyme
Location: 282816 - 284843 (+)
Type: CAZyme
Location: 282816 - 284843 (+)
Gene ID: MGYG000004172_1_210
Type: TC
Location: 284984 - 286414 (-)
Type: TC
Location: 284984 - 286414 (-)
Gene ID: MGYG000004172_1_211
Type: CAZyme
Location: 286522 - 288834 (-)
Type: CAZyme
Location: 286522 - 288834 (-)
Gene ID: MGYG000004172_1_212
Type: pfam
Location: 289021 - 289794 (-)
Type: pfam
Location: 289021 - 289794 (-)
Gene ID: MGYG000004172_1_213
Type: TC
Location: 290119 - 291318 (+)
Type: TC
Location: 290119 - 291318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Gallalistipes
Species
Gallalistipes aquisgranensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.