Cluster: MGYG000004172_CGC52
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004172
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004172_15 | MGYG000004172_15_15 | 18450 | 20993 | - | GH20 |
| CAZyme | MGYG000004172_15 | MGYG000004172_15_16 | 21003 | 22448 | - | GH28 |
| pfam | MGYG000004172_15 | MGYG000004172_15_17 | 22435 | 23406 | - | AP_endonuc_2 |
| pfam | MGYG000004172_15 | MGYG000004172_15_18 | 23412 | 24650 | - | Nramp |
| CAZyme | MGYG000004172_15 | MGYG000004172_15_19 | 24898 | 26589 | + | GH105 |
| pfam | MGYG000004172_15 | MGYG000004172_15_20 | 26630 | 27826 | + | PD40 |
| TF | MGYG000004172_15 | MGYG000004172_15_21 | 27915 | 28973 | + | LacI |
| TC | MGYG000004172_15 | MGYG000004172_15_22 | 29042 | 29293 | + | 1.E.43.1.10 |
| TC | MGYG000004172_15 | MGYG000004172_15_23 | 29438 | 30868 | + | 2.A.114.1.4 |
| NULL(UNKNOWN) | MGYG000004172_15 | MGYG000004172_15_24 | 30849 | 31544 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004172_15 | MGYG000004172_15_25 | 31552 | 32517 | + | Radical_SAM | Radical_SAM_C |
| TC | MGYG000004172_15 | MGYG000004172_15_26 | 33273 | 34433 | + | 2.A.1.2.14 |
| TC | MGYG000004172_15 | MGYG000004172_15_27 | 34590 | 36203 | - | 4.C.1.1.14 |
Gene ID: MGYG000004172_15_15
Type: CAZyme
Location: 18450 - 20993 (-)
Type: CAZyme
Location: 18450 - 20993 (-)
Gene ID: MGYG000004172_15_16
Type: CAZyme
Location: 21003 - 22448 (-)
Type: CAZyme
Location: 21003 - 22448 (-)
Gene ID: MGYG000004172_15_17
Type: pfam
Location: 22435 - 23406 (-)
Type: pfam
Location: 22435 - 23406 (-)
Gene ID: MGYG000004172_15_18
Type: pfam
Location: 23412 - 24650 (-)
Type: pfam
Location: 23412 - 24650 (-)
Gene ID: MGYG000004172_15_19
Type: CAZyme
Location: 24898 - 26589 (+)
Type: CAZyme
Location: 24898 - 26589 (+)
Gene ID: MGYG000004172_15_20
Type: pfam
Location: 26630 - 27826 (+)
Type: pfam
Location: 26630 - 27826 (+)
Gene ID: MGYG000004172_15_21
Type: TF
Location: 27915 - 28973 (+)
Type: TF
Location: 27915 - 28973 (+)
Gene ID: MGYG000004172_15_22
Type: TC
Location: 29042 - 29293 (+)
Type: TC
Location: 29042 - 29293 (+)
Gene ID: MGYG000004172_15_23
Type: TC
Location: 29438 - 30868 (+)
Type: TC
Location: 29438 - 30868 (+)
Gene ID: MGYG000004172_15_24
Type:
Location: 30849 - 31544 (+)
Type:
Location: 30849 - 31544 (+)
Gene ID: MGYG000004172_15_25
Type: pfam
Location: 31552 - 32517 (+)
Type: pfam
Location: 31552 - 32517 (+)
Gene ID: MGYG000004172_15_26
Type: TC
Location: 33273 - 34433 (+)
Type: TC
Location: 33273 - 34433 (+)
Gene ID: MGYG000004172_15_27
Type: TC
Location: 34590 - 36203 (-)
Type: TC
Location: 34590 - 36203 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Gallalistipes
Species
Gallalistipes aquisgranensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.