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Cluster: MGYG000004172_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004172_7 MGYG000004172_7_22 32155 33381 - 2.A.1.10.1
TC MGYG000004172_7 MGYG000004172_7_23 33645 36992 + 1.B.14.6.3
CAZyme MGYG000004172_7 MGYG000004172_7_24 37369 38652 + GH177
NULL(UNKNOWN) MGYG000004172_7 MGYG000004172_7_25 38655 38915 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004172_7 MGYG000004172_7_26 38934 39812 + ApbE
CAZyme MGYG000004172_7 MGYG000004172_7_27 39895 40803 + GT2
CAZyme MGYG000004172_7 MGYG000004172_7_28 40817 41749 - GT2
Gene ID: MGYG000004172_7_22
Type: TC
Location: 32155 - 33381 (-)
Gene ID: MGYG000004172_7_23
Type: TC
Location: 33645 - 36992 (+)
Gene ID: MGYG000004172_7_24
Type: CAZyme
Location: 37369 - 38652 (+)
Gene ID: MGYG000004172_7_25
Type:
Location: 38655 - 38915 (+)
Gene ID: MGYG000004172_7_26
Type: pfam
Location: 38934 - 39812 (+)
Gene ID: MGYG000004172_7_27
Type: CAZyme
Location: 39895 - 40803 (+)
Gene ID: MGYG000004172_7_28
Type: CAZyme
Location: 40817 - 41749 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004172_7_22 vegan > vegetarian 1.00902 0.01982

🧭 Explore Read Mapping of CGC

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