Cluster: MGYG000004172_CGC35
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004172
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004172_5 | MGYG000004172_5_161 | 217911 | 219077 | + | GH33 |
| TC | MGYG000004172_5 | MGYG000004172_5_162 | 219111 | 221726 | + | 2.A.21.3.10 |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_163 | 221803 | 223887 | - | PL8_3 |
| TC | MGYG000004172_5 | MGYG000004172_5_164 | 223928 | 225592 | - | 8.A.46.1.1 |
| TC | MGYG000004172_5 | MGYG000004172_5_165 | 225601 | 228846 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000004172_5 | MGYG000004172_5_166 | 228881 | 230857 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_167 | 231169 | 234255 | + | PL8_2 |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_168 | 234551 | 235825 | + | GH105 |
| TF | MGYG000004172_5 | MGYG000004172_5_169 | 235931 | 240022 | - | HTH_AraC |
| pfam | MGYG000004172_5 | MGYG000004172_5_170 | 240200 | 240847 | + | CBM9_2 |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_171 | 240984 | 242198 | + | GH88 |
Gene ID: MGYG000004172_5_161
Type: CAZyme
Location: 217911 - 219077 (+)
Type: CAZyme
Location: 217911 - 219077 (+)
Gene ID: MGYG000004172_5_162
Type: TC
Location: 219111 - 221726 (+)
Type: TC
Location: 219111 - 221726 (+)
Gene ID: MGYG000004172_5_163
Type: CAZyme
Location: 221803 - 223887 (-)
Type: CAZyme
Location: 221803 - 223887 (-)
Gene ID: MGYG000004172_5_164
Type: TC
Location: 223928 - 225592 (-)
Type: TC
Location: 223928 - 225592 (-)
Gene ID: MGYG000004172_5_165
Type: TC
Location: 225601 - 228846 (-)
Type: TC
Location: 225601 - 228846 (-)
Gene ID: MGYG000004172_5_166
Type:
Location: 228881 - 230857 (-)
Type:
Location: 228881 - 230857 (-)
Gene ID: MGYG000004172_5_167
Type: CAZyme
Location: 231169 - 234255 (+)
Type: CAZyme
Location: 231169 - 234255 (+)
Gene ID: MGYG000004172_5_168
Type: CAZyme
Location: 234551 - 235825 (+)
Type: CAZyme
Location: 234551 - 235825 (+)
Gene ID: MGYG000004172_5_169
Type: TF
Location: 235931 - 240022 (-)
Type: TF
Location: 235931 - 240022 (-)
Gene ID: MGYG000004172_5_170
Type: pfam
Location: 240200 - 240847 (+)
Type: pfam
Location: 240200 - 240847 (+)
Gene ID: MGYG000004172_5_171
Type: CAZyme
Location: 240984 - 242198 (+)
Type: CAZyme
Location: 240984 - 242198 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Gallalistipes
Species
Gallalistipes aquisgranensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.