Cluster: MGYG000004172_CGC34
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004172
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004172_5 | MGYG000004172_5_145 | 187898 | 190834 | - | 1.B.14.6.1 |
| pfam | MGYG000004172_5 | MGYG000004172_5_146 | 190995 | 191954 | - | Metallophos |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_147 | 192042 | 193679 | - | GH39 |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_148 | 193740 | 195629 | - | PL35 |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_149 | 195723 | 199451 | - | GH2 | GH28 |
| sulfatase | MGYG000004172_5 | MGYG000004172_5_150 | 199535 | 201127 | - | S1_4 |
| sulfatase | MGYG000004172_5 | MGYG000004172_5_151 | 201137 | 202681 | - | S1_8 |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_152 | 202738 | 205869 | - | GH2 |
| TF | MGYG000004172_5 | MGYG000004172_5_153 | 206147 | 210238 | + | HTH_AraC |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_154 | 210261 | 212351 | + | PL35 |
| CAZyme | MGYG000004172_5 | MGYG000004172_5_155 | 212362 | 213450 | + | GH105 |
| NULL(UNKNOWN) | MGYG000004172_5 | MGYG000004172_5_156 | 213643 | 213933 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004172_5 | MGYG000004172_5_157 | 214595 | 215962 | - | 1.A.23.4.5 |
Gene ID: MGYG000004172_5_145
Type: TC
Location: 187898 - 190834 (-)
Type: TC
Location: 187898 - 190834 (-)
Gene ID: MGYG000004172_5_146
Type: pfam
Location: 190995 - 191954 (-)
Type: pfam
Location: 190995 - 191954 (-)
Gene ID: MGYG000004172_5_147
Type: CAZyme
Location: 192042 - 193679 (-)
Type: CAZyme
Location: 192042 - 193679 (-)
Gene ID: MGYG000004172_5_148
Type: CAZyme
Location: 193740 - 195629 (-)
Type: CAZyme
Location: 193740 - 195629 (-)
Gene ID: MGYG000004172_5_149
Type: CAZyme
Location: 195723 - 199451 (-)
Type: CAZyme
Location: 195723 - 199451 (-)
Gene ID: MGYG000004172_5_150
Type: sulfatase
Location: 199535 - 201127 (-)
Type: sulfatase
Location: 199535 - 201127 (-)
Gene ID: MGYG000004172_5_151
Type: sulfatase
Location: 201137 - 202681 (-)
Type: sulfatase
Location: 201137 - 202681 (-)
Gene ID: MGYG000004172_5_152
Type: CAZyme
Location: 202738 - 205869 (-)
Type: CAZyme
Location: 202738 - 205869 (-)
Gene ID: MGYG000004172_5_153
Type: TF
Location: 206147 - 210238 (+)
Type: TF
Location: 206147 - 210238 (+)
Gene ID: MGYG000004172_5_154
Type: CAZyme
Location: 210261 - 212351 (+)
Type: CAZyme
Location: 210261 - 212351 (+)
Gene ID: MGYG000004172_5_155
Type: CAZyme
Location: 212362 - 213450 (+)
Type: CAZyme
Location: 212362 - 213450 (+)
Gene ID: MGYG000004172_5_156
Type:
Location: 213643 - 213933 (+)
Type:
Location: 213643 - 213933 (+)
Gene ID: MGYG000004172_5_157
Type: TC
Location: 214595 - 215962 (-)
Type: TC
Location: 214595 - 215962 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Gallalistipes
Species
Gallalistipes aquisgranensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004172_5_157 | vegan > omnivore | 1.03545 | 0.00091 |