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Cluster: MGYG000004172_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004172_5 MGYG000004172_5_10 11220 12251 - GH43_26
CAZyme MGYG000004172_5 MGYG000004172_5_11 12267 13502 - GH154
CAZyme MGYG000004172_5 MGYG000004172_5_12 13516 14601 - GH105
TF MGYG000004172_5 MGYG000004172_5_13 14700 18755 + HTH_AraC | HTH_AraC
CAZyme MGYG000004172_5 MGYG000004172_5_14 18796 20829 - GH182
CAZyme MGYG000004172_5 MGYG000004172_5_15 20873 23974 - GH115
TC MGYG000004172_5 MGYG000004172_5_16 24055 25872 - 9.A.25.1.1
pfam MGYG000004172_5 MGYG000004172_5_17 25893 27737 - SusD_RagB | SusD-like_3
TC MGYG000004172_5 MGYG000004172_5_18 27755 30742 - 1.B.14.6.1
TC MGYG000004172_5 MGYG000004172_5_19 30801 32510 - 8.A.46.1.3
TC MGYG000004172_5 MGYG000004172_5_20 32517 35636 - 1.B.14.6.1
Gene ID: MGYG000004172_5_10
Type: CAZyme
Location: 11220 - 12251 (-)
Gene ID: MGYG000004172_5_11
Type: CAZyme
Location: 12267 - 13502 (-)
Gene ID: MGYG000004172_5_12
Type: CAZyme
Location: 13516 - 14601 (-)
Gene ID: MGYG000004172_5_13
Type: TF
Location: 14700 - 18755 (+)
Gene ID: MGYG000004172_5_14
Type: CAZyme
Location: 18796 - 20829 (-)
Gene ID: MGYG000004172_5_15
Type: CAZyme
Location: 20873 - 23974 (-)
Gene ID: MGYG000004172_5_16
Type: TC
Location: 24055 - 25872 (-)
Gene ID: MGYG000004172_5_17
Type: pfam
Location: 25893 - 27737 (-)
Gene ID: MGYG000004172_5_18
Type: TC
Location: 27755 - 30742 (-)
Gene ID: MGYG000004172_5_19
Type: TC
Location: 30801 - 32510 (-)
Gene ID: MGYG000004172_5_20
Type: TC
Location: 32517 - 35636 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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