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Cluster: MGYG000004172_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004172_3 MGYG000004172_3_5 3873 6164 - GH92
CAZyme MGYG000004172_3 MGYG000004172_3_6 6172 9705 - GH125 | GH92
CAZyme MGYG000004172_3 MGYG000004172_3_7 9706 11928 - GH92
CAZyme MGYG000004172_3 MGYG000004172_3_8 12047 13054 - GH130_2
pfam MGYG000004172_3 MGYG000004172_3_9 13061 14359 - MFS_1 | MFS_1
pfam MGYG000004172_3 MGYG000004172_3_10 14552 16096 - BACON | BACON | BACON_2
CAZyme MGYG000004172_3 MGYG000004172_3_11 16154 17554 - GH18
pfam MGYG000004172_3 MGYG000004172_3_12 17579 18811 - Pentaxin | BT_3987-like_N | Laminin_G_3
pfam MGYG000004172_3 MGYG000004172_3_13 18818 19828 - GH18_BT1044-like
TC MGYG000004172_3 MGYG000004172_3_14 19844 21427 - 8.A.46.2.2
TC MGYG000004172_3 MGYG000004172_3_15 21433 24798 - 1.B.14.6.13
Gene ID: MGYG000004172_3_5
Type: CAZyme
Location: 3873 - 6164 (-)
Gene ID: MGYG000004172_3_6
Type: CAZyme
Location: 6172 - 9705 (-)
Gene ID: MGYG000004172_3_7
Type: CAZyme
Location: 9706 - 11928 (-)
Gene ID: MGYG000004172_3_8
Type: CAZyme
Location: 12047 - 13054 (-)
Gene ID: MGYG000004172_3_9
Type: pfam
Location: 13061 - 14359 (-)
Gene ID: MGYG000004172_3_10
Type: pfam
Location: 14552 - 16096 (-)
Gene ID: MGYG000004172_3_11
Type: CAZyme
Location: 16154 - 17554 (-)
Gene ID: MGYG000004172_3_12
Type: pfam
Location: 17579 - 18811 (-)
Gene ID: MGYG000004172_3_13
Type: pfam
Location: 18818 - 19828 (-)
Gene ID: MGYG000004172_3_14
Type: TC
Location: 19844 - 21427 (-)
Gene ID: MGYG000004172_3_15
Type: TC
Location: 21433 - 24798 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004172_3_9 omnivore > vegan 1.40456 0.01307

🧭 Explore Read Mapping of CGC

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