dbCAN HGM

Cluster: MGYG000004172_CGC10

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	MGYG000004172_1	MGYG000004172_1_231	309340	310665	-	GH50
CAZyme	MGYG000004172_1	MGYG000004172_1_232	311339	313723	+	GH154 \| GH88
TC	MGYG000004172_1	MGYG000004172_1_233	313794	316847	+	1.B.14.6.1
pfam	MGYG000004172_1	MGYG000004172_1_234	316872	318509	+	SusD_RagB \| SusD-like_3
CAZyme	MGYG000004172_1	MGYG000004172_1_235	318620	321484	+	GH2
pfam	MGYG000004172_1	MGYG000004172_1_236	321493	324498	+	F5_F8_type_C \| F5_F8_type_C_2 \| CBM96
CAZyme	MGYG000004172_1	MGYG000004172_1_237	324551	326377	+	CBM32 \| GH43_28
pfam	MGYG000004172_1	MGYG000004172_1_238	326400	327365	+	BACON
CAZyme	MGYG000004172_1	MGYG000004172_1_239	327520	328851	+	GH177

Gene ID: MGYG000004172_1_231
Type: CAZyme
Location: 309340 - 310665 (-)

Gene ID: MGYG000004172_1_232
Type: CAZyme
Location: 311339 - 313723 (+)

Gene ID: MGYG000004172_1_233
Type: TC
Location: 313794 - 316847 (+)

Gene ID: MGYG000004172_1_234
Type: pfam
Location: 316872 - 318509 (+)

Gene ID: MGYG000004172_1_235
Type: CAZyme
Location: 318620 - 321484 (+)

Gene ID: MGYG000004172_1_236
Type: pfam
Location: 321493 - 324498 (+)

Gene ID: MGYG000004172_1_237
Type: CAZyme
Location: 324551 - 326377 (+)

Gene ID: MGYG000004172_1_238
Type: pfam
Location: 326400 - 327365 (+)

Gene ID: MGYG000004172_1_239
Type: CAZyme
Location: 327520 - 328851 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.