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Cluster: MGYG000004172_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004172_1 MGYG000004172_1_16 10281 11582 + CE7
STP MGYG000004172_1 MGYG000004172_1_17 11796 12440 + Nitroreductase
CAZyme MGYG000004172_1 MGYG000004172_1_18 12496 16179 - GH106
CAZyme MGYG000004172_1 MGYG000004172_1_19 16192 17400 - GH88
NULL(UNKNOWN) MGYG000004172_1 MGYG000004172_1_20 17457 17750 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004172_1 MGYG000004172_1_21 17799 19505 + DUF6377
CAZyme MGYG000004172_1 MGYG000004172_1_22 19720 22011 + GH92
TC MGYG000004172_1 MGYG000004172_1_23 22054 25035 + 1.B.14.6.1
TC MGYG000004172_1 MGYG000004172_1_24 25048 26619 + 8.A.46.1.1
pfam MGYG000004172_1 MGYG000004172_1_25 26632 27792 + SusE | SusF_SusE
pfam MGYG000004172_1 MGYG000004172_1_26 27819 29381 + SusE | SusE
CAZyme MGYG000004172_1 MGYG000004172_1_27 29456 30826 + GH13
CAZyme MGYG000004172_1 MGYG000004172_1_28 30846 32255 + GH28
CAZyme MGYG000004172_1 MGYG000004172_1_29 32261 33706 + CE20
TC MGYG000004172_1 MGYG000004172_1_30 33749 34852 - 3.A.1.105.16
TC MGYG000004172_1 MGYG000004172_1_31 34855 35949 - 3.A.1.105.4
TC MGYG000004172_1 MGYG000004172_1_32 35949 36689 - 3.A.1.105.4
TC MGYG000004172_1 MGYG000004172_1_33 36682 37599 - 3.A.1.105.15
TC MGYG000004172_1 MGYG000004172_1_34 37624 38334 - 3.A.1.105.4
Gene ID: MGYG000004172_1_16
Type: CAZyme
Location: 10281 - 11582 (+)
Gene ID: MGYG000004172_1_17
Type: STP
Location: 11796 - 12440 (+)
Gene ID: MGYG000004172_1_18
Type: CAZyme
Location: 12496 - 16179 (-)
Gene ID: MGYG000004172_1_19
Type: CAZyme
Location: 16192 - 17400 (-)
Gene ID: MGYG000004172_1_20
Type:
Location: 17457 - 17750 (-)
Gene ID: MGYG000004172_1_21
Type: pfam
Location: 17799 - 19505 (+)
Gene ID: MGYG000004172_1_22
Type: CAZyme
Location: 19720 - 22011 (+)
Gene ID: MGYG000004172_1_23
Type: TC
Location: 22054 - 25035 (+)
Gene ID: MGYG000004172_1_24
Type: TC
Location: 25048 - 26619 (+)
Gene ID: MGYG000004172_1_25
Type: pfam
Location: 26632 - 27792 (+)
Gene ID: MGYG000004172_1_26
Type: pfam
Location: 27819 - 29381 (+)
Gene ID: MGYG000004172_1_27
Type: CAZyme
Location: 29456 - 30826 (+)
Gene ID: MGYG000004172_1_28
Type: CAZyme
Location: 30846 - 32255 (+)
Gene ID: MGYG000004172_1_29
Type: CAZyme
Location: 32261 - 33706 (+)
Gene ID: MGYG000004172_1_30
Type: TC
Location: 33749 - 34852 (-)
Gene ID: MGYG000004172_1_31
Type: TC
Location: 34855 - 35949 (-)
Gene ID: MGYG000004172_1_32
Type: TC
Location: 35949 - 36689 (-)
Gene ID: MGYG000004172_1_33
Type: TC
Location: 36682 - 37599 (-)
Gene ID: MGYG000004172_1_34
Type: TC
Location: 37624 - 38334 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004172_1_30 vegetarian > omnivore 1.16064 0.03849
MGYG000004172_1_33 vegetarian > vegan 1.52534 0.01047

🧭 Explore Read Mapping of CGC

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