Cluster: MGYG000004171_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004171
- CGC Family ID: CGCFAM_00501
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004171_34 | MGYG000004171_34_11 | 12233 | 14083 | - | CE4 |
| TC | MGYG000004171_34 | MGYG000004171_34_12 | 14101 | 15639 | - | 2.A.50.2.1 |
| pfam | MGYG000004171_34 | MGYG000004171_34_13 | 15643 | 15867 | - | PP-binding |
| pfam | MGYG000004171_34 | MGYG000004171_34_14 | 15871 | 16800 | - | Acetyltransf_1 |
| TC | MGYG000004171_34 | MGYG000004171_34_15 | 16784 | 18313 | - | 4.C.1.1.4 |
Gene ID: MGYG000004171_34_11
Type: CAZyme
Location: 12233 - 14083 (-)
Type: CAZyme
Location: 12233 - 14083 (-)
Gene ID: MGYG000004171_34_12
Type: TC
Location: 14101 - 15639 (-)
Type: TC
Location: 14101 - 15639 (-)
Gene ID: MGYG000004171_34_13
Type: pfam
Location: 15643 - 15867 (-)
Type: pfam
Location: 15643 - 15867 (-)
Gene ID: MGYG000004171_34_14
Type: pfam
Location: 15871 - 16800 (-)
Type: pfam
Location: 15871 - 16800 (-)
Gene ID: MGYG000004171_34_15
Type: TC
Location: 16784 - 18313 (-)
Type: TC
Location: 16784 - 18313 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Alangreenwoodia
Species
Alangreenwoodia sp905206455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004171_34_13 | vegan > omnivore | 3.78103 | 0.00937 |
| MGYG000004171_34_13 | vegan > vegetarian | 22.51057 | 0.00896 |
| MGYG000004171_34_14 | vegan > vegetarian | 1.77287 | 0.03830 |