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Cluster: MGYG000004152_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004152_4 MGYG000004152_4_18 16747 17085 - 4.A.3.1.2
TF MGYG000004152_4 MGYG000004152_4_19 17300 18304 - LacI
TC MGYG000004152_4 MGYG000004152_4_20 18662 20437 + 4.A.3.1.1
CAZyme MGYG000004152_4 MGYG000004152_4_21 20504 21943 + GH1
TF MGYG000004152_4 MGYG000004152_4_22 22211 23248 - LacI
CAZyme MGYG000004152_4 MGYG000004152_4_23 23590 25032 + GH1
TC MGYG000004152_4 MGYG000004152_4_24 25209 26969 + 4.A.3.1.1
TF MGYG000004152_4 MGYG000004152_4_25 27227 28237 - LacI
TC MGYG000004152_4 MGYG000004152_4_26 28513 30276 + 4.A.3.1.1
CAZyme MGYG000004152_4 MGYG000004152_4_27 30353 31774 + GH1
Gene ID: MGYG000004152_4_18
Type: TC
Location: 16747 - 17085 (-)
Gene ID: MGYG000004152_4_19
Type: TF
Location: 17300 - 18304 (-)
Gene ID: MGYG000004152_4_20
Type: TC
Location: 18662 - 20437 (+)
Gene ID: MGYG000004152_4_21
Type: CAZyme
Location: 20504 - 21943 (+)
Gene ID: MGYG000004152_4_22
Type: TF
Location: 22211 - 23248 (-)
Gene ID: MGYG000004152_4_23
Type: CAZyme
Location: 23590 - 25032 (+)
Gene ID: MGYG000004152_4_24
Type: TC
Location: 25209 - 26969 (+)
Gene ID: MGYG000004152_4_25
Type: TF
Location: 27227 - 28237 (-)
Gene ID: MGYG000004152_4_26
Type: TC
Location: 28513 - 30276 (+)
Gene ID: MGYG000004152_4_27
Type: CAZyme
Location: 30353 - 31774 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004152_4_22 vegetarian > omnivore 1.05034 0.00841

🧭 Explore Read Mapping of CGC

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