Cluster: MGYG000004151_CGC39
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004151
- CGC Family ID: CGCFAM_00529
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004151_131 | MGYG000004151_131_4 | 1926 | 4385 | + | GT35 |
| NULL(UNKNOWN) | MGYG000004151_131 | MGYG000004151_131_5 | 4389 | 4793 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004151_131 | MGYG000004151_131_6 | 4960 | 5484 | + | 9.B.20.2.1 |
| NULL(UNKNOWN) | MGYG000004151_131 | MGYG000004151_131_7 | 5474 | 5716 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004151_131 | MGYG000004151_131_8 | 5726 | 6601 | + | Ku |
| CAZyme | MGYG000004151_131 | MGYG000004151_131_9 | 6717 | 8699 | + | GH13_3 |
| CAZyme | MGYG000004151_131 | MGYG000004151_131_10 | 8710 | 12036 | + | GH13_16 |
| CAZyme | MGYG000004151_131 | MGYG000004151_131_11 | 12033 | 14225 | + | CBM48 | GH13_9 |
Gene ID: MGYG000004151_131_4
Type: CAZyme
Location: 1926 - 4385 (+)
Type: CAZyme
Location: 1926 - 4385 (+)
Gene ID: MGYG000004151_131_5
Type:
Location: 4389 - 4793 (-)
Type:
Location: 4389 - 4793 (-)
Gene ID: MGYG000004151_131_6
Type: TC
Location: 4960 - 5484 (+)
Type: TC
Location: 4960 - 5484 (+)
Gene ID: MGYG000004151_131_7
Type:
Location: 5474 - 5716 (+)
Type:
Location: 5474 - 5716 (+)
Gene ID: MGYG000004151_131_8
Type: pfam
Location: 5726 - 6601 (+)
Type: pfam
Location: 5726 - 6601 (+)
Gene ID: MGYG000004151_131_9
Type: CAZyme
Location: 6717 - 8699 (+)
Type: CAZyme
Location: 6717 - 8699 (+)
Gene ID: MGYG000004151_131_10
Type: CAZyme
Location: 8710 - 12036 (+)
Type: CAZyme
Location: 8710 - 12036 (+)
Gene ID: MGYG000004151_131_11
Type: CAZyme
Location: 12033 - 14225 (+)
Type: CAZyme
Location: 12033 - 14225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas citronellolis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.