Cluster: MGYG000004151_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004151
- CGC Family ID: CGCFAM_04111
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004151_58 | MGYG000004151_58_25 | 31517 | 32320 | - | 8.A.5.1.4 |
| STP | MGYG000004151_58 | MGYG000004151_58_26 | 32317 | 33492 | - | Pyr_redox_2 |
| TC | MGYG000004151_58 | MGYG000004151_58_27 | 33548 | 33880 | - | 2.A.7.1.11 |
| TF | MGYG000004151_58 | MGYG000004151_58_28 | 33992 | 34870 | + | HTH_1 |
| CAZyme | MGYG000004151_58 | MGYG000004151_58_29 | 35059 | 36327 | + | GT30 |
Gene ID: MGYG000004151_58_25
Type: TC
Location: 31517 - 32320 (-)
Type: TC
Location: 31517 - 32320 (-)
Gene ID: MGYG000004151_58_26
Type: STP
Location: 32317 - 33492 (-)
Type: STP
Location: 32317 - 33492 (-)
Gene ID: MGYG000004151_58_27
Type: TC
Location: 33548 - 33880 (-)
Type: TC
Location: 33548 - 33880 (-)
Gene ID: MGYG000004151_58_28
Type: TF
Location: 33992 - 34870 (+)
Type: TF
Location: 33992 - 34870 (+)
Gene ID: MGYG000004151_58_29
Type: CAZyme
Location: 35059 - 36327 (+)
Type: CAZyme
Location: 35059 - 36327 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas citronellolis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.