Cluster: MGYG000004151_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004151
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004151_46 | MGYG000004151_46_24 | 26087 | 27565 | - | 1.B.52.2.1 |
| pfam | MGYG000004151_46 | MGYG000004151_46_25 | 27704 | 28519 | - | TatD_DNase |
| CAZyme | MGYG000004151_46 | MGYG000004151_46_26 | 29012 | 30436 | + | GH23 |
| pfam | MGYG000004151_46 | MGYG000004151_46_27 | 30556 | 30990 | + | DoxX |
| TC | MGYG000004151_46 | MGYG000004151_46_28 | 31057 | 32088 | - | 2.A.98.1.3 |
Gene ID: MGYG000004151_46_24
Type: TC
Location: 26087 - 27565 (-)
Type: TC
Location: 26087 - 27565 (-)
Gene ID: MGYG000004151_46_25
Type: pfam
Location: 27704 - 28519 (-)
Type: pfam
Location: 27704 - 28519 (-)
Gene ID: MGYG000004151_46_26
Type: CAZyme
Location: 29012 - 30436 (+)
Type: CAZyme
Location: 29012 - 30436 (+)
Gene ID: MGYG000004151_46_27
Type: pfam
Location: 30556 - 30990 (+)
Type: pfam
Location: 30556 - 30990 (+)
Gene ID: MGYG000004151_46_28
Type: TC
Location: 31057 - 32088 (-)
Type: TC
Location: 31057 - 32088 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas citronellolis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.