Cluster: MGYG000004151_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004151
- CGC Family ID: CGCFAM_09546
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004151_29 | MGYG000004151_29_43 | 50364 | 52358 | + | 1.I.1.1.3 |
| TC | MGYG000004151_29 | MGYG000004151_29_44 | 53062 | 53796 | - | 3.A.1.3.4 |
| TC | MGYG000004151_29 | MGYG000004151_29_45 | 53789 | 54751 | - | 3.A.1.3.17 |
| TC | MGYG000004151_29 | MGYG000004151_29_46 | 54824 | 55621 | - | 3.A.1.3.27 |
| CAZyme | MGYG000004151_29 | MGYG000004151_29_47 | 55858 | 58443 | - | GT2 |
Gene ID: MGYG000004151_29_43
Type: TC
Location: 50364 - 52358 (+)
Type: TC
Location: 50364 - 52358 (+)
Gene ID: MGYG000004151_29_44
Type: TC
Location: 53062 - 53796 (-)
Type: TC
Location: 53062 - 53796 (-)
Gene ID: MGYG000004151_29_45
Type: TC
Location: 53789 - 54751 (-)
Type: TC
Location: 53789 - 54751 (-)
Gene ID: MGYG000004151_29_46
Type: TC
Location: 54824 - 55621 (-)
Type: TC
Location: 54824 - 55621 (-)
Gene ID: MGYG000004151_29_47
Type: CAZyme
Location: 55858 - 58443 (-)
Type: CAZyme
Location: 55858 - 58443 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas citronellolis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.