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Cluster: MGYG000004151_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004151_18 MGYG000004151_18_19 20613 21401 + GT2
pfam MGYG000004151_18 MGYG000004151_18_20 21419 22438 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | GDP_Man_Dehyd
pfam MGYG000004151_18 MGYG000004151_18_21 22469 23491 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd
TC MGYG000004151_18 MGYG000004151_18_22 23705 25117 + 9.B.18.1.1
TC MGYG000004151_18 MGYG000004151_18_23 25765 26823 + 1.B.18.3.1
pfam MGYG000004151_18 MGYG000004151_18_24 26845 27504 + YjbF
pfam MGYG000004151_18 MGYG000004151_18_25 27501 28268 + Caps_syn_GfcC_C | Caps_syn_GfcC_N
TC MGYG000004151_18 MGYG000004151_18_26 28265 30349 + 1.B.14.16.4
pfam MGYG000004151_18 MGYG000004151_18_27 30481 30885 + YscW
pfam MGYG000004151_18 MGYG000004151_18_28 30998 31675 + DUF4197
TC MGYG000004151_18 MGYG000004151_18_29 31921 34992 - 2.A.6.2.17
TC MGYG000004151_18 MGYG000004151_18_30 34999 36102 - 3.A.1.122.1
Gene ID: MGYG000004151_18_19
Type: CAZyme
Location: 20613 - 21401 (+)
Gene ID: MGYG000004151_18_20
Type: pfam
Location: 21419 - 22438 (+)
Gene ID: MGYG000004151_18_21
Type: pfam
Location: 22469 - 23491 (+)
Gene ID: MGYG000004151_18_22
Type: TC
Location: 23705 - 25117 (+)
Gene ID: MGYG000004151_18_23
Type: TC
Location: 25765 - 26823 (+)
Gene ID: MGYG000004151_18_24
Type: pfam
Location: 26845 - 27504 (+)
Gene ID: MGYG000004151_18_25
Type: pfam
Location: 27501 - 28268 (+)
Gene ID: MGYG000004151_18_26
Type: TC
Location: 28265 - 30349 (+)
Gene ID: MGYG000004151_18_27
Type: pfam
Location: 30481 - 30885 (+)
Gene ID: MGYG000004151_18_28
Type: pfam
Location: 30998 - 31675 (+)
Gene ID: MGYG000004151_18_29
Type: TC
Location: 31921 - 34992 (-)
Gene ID: MGYG000004151_18_30
Type: TC
Location: 34999 - 36102 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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