Cluster: MGYG000004151_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004151
- CGC Family ID: CGCFAM_00359
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004151_2 | MGYG000004151_2_2 | 943 | 2568 | - | 3.A.1.5.21 |
| TC | MGYG000004151_2 | MGYG000004151_2_3 | 2570 | 3589 | - | 3.A.1.5.21 |
| TC | MGYG000004151_2 | MGYG000004151_2_4 | 3594 | 4679 | - | 3.A.1.5.24 |
| TC | MGYG000004151_2 | MGYG000004151_2_5 | 4679 | 6502 | - | 3.A.1.5.24 |
| CAZyme | MGYG000004151_2 | MGYG000004151_2_6 | 6966 | 8570 | - | GH23 |
Gene ID: MGYG000004151_2_2
Type: TC
Location: 943 - 2568 (-)
Type: TC
Location: 943 - 2568 (-)
Gene ID: MGYG000004151_2_3
Type: TC
Location: 2570 - 3589 (-)
Type: TC
Location: 2570 - 3589 (-)
Gene ID: MGYG000004151_2_4
Type: TC
Location: 3594 - 4679 (-)
Type: TC
Location: 3594 - 4679 (-)
Gene ID: MGYG000004151_2_5
Type: TC
Location: 4679 - 6502 (-)
Type: TC
Location: 4679 - 6502 (-)
Gene ID: MGYG000004151_2_6
Type: CAZyme
Location: 6966 - 8570 (-)
Type: CAZyme
Location: 6966 - 8570 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas citronellolis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.