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Cluster: MGYG000004148_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004148_9 MGYG000004148_9_3 2271 3671 + GH1
TC MGYG000004148_9 MGYG000004148_9_4 3792 5135 + 4.A.3.2.9
TC MGYG000004148_9 MGYG000004148_9_5 5297 5599 + 4.A.3.2.9
TC MGYG000004148_9 MGYG000004148_9_6 5609 5941 + 4.A.3.2.3
pfam MGYG000004148_9 MGYG000004148_9_7 6183 7136 + ROK
pfam MGYG000004148_9 MGYG000004148_9_8 7305 8228 + DHH | DHHA2
TC MGYG000004148_9 MGYG000004148_9_9 8497 9855 + 2.A.33.1.1
Gene ID: MGYG000004148_9_3
Type: CAZyme
Location: 2271 - 3671 (+)
Gene ID: MGYG000004148_9_4
Type: TC
Location: 3792 - 5135 (+)
Gene ID: MGYG000004148_9_5
Type: TC
Location: 5297 - 5599 (+)
Gene ID: MGYG000004148_9_6
Type: TC
Location: 5609 - 5941 (+)
Gene ID: MGYG000004148_9_7
Type: pfam
Location: 6183 - 7136 (+)
Gene ID: MGYG000004148_9_8
Type: pfam
Location: 7305 - 8228 (+)
Gene ID: MGYG000004148_9_9
Type: TC
Location: 8497 - 9855 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004148_9_5 vegan > omnivore 1.06717 0.01560

🧭 Explore Read Mapping of CGC

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