Cluster: MGYG000004146_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004146
- CGC Family ID: CGCFAM_01104
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004146_4 | MGYG000004146_4_31 | 34024 | 35511 | - | 2.A.66.2.22 |
| pfam | MGYG000004146_4 | MGYG000004146_4_32 | 35911 | 36750 | + | LicD |
| NULL(UNKNOWN) | MGYG000004146_4 | MGYG000004146_4_33 | 36838 | 38262 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004146_4 | MGYG000004146_4_34 | 38275 | 39486 | + | GT4 |
| CAZyme | MGYG000004146_4 | MGYG000004146_4_35 | 39522 | 40646 | + | GT4 |
| pfam | MGYG000004146_4 | MGYG000004146_4_36 | 40787 | 41989 | - | Iso_dh |
| TC | MGYG000004146_4 | MGYG000004146_4_37 | 42313 | 42939 | + | 2.A.115.2.14 |
Gene ID: MGYG000004146_4_31
Type: TC
Location: 34024 - 35511 (-)
Type: TC
Location: 34024 - 35511 (-)
Gene ID: MGYG000004146_4_32
Type: pfam
Location: 35911 - 36750 (+)
Type: pfam
Location: 35911 - 36750 (+)
Gene ID: MGYG000004146_4_33
Type:
Location: 36838 - 38262 (+)
Type:
Location: 36838 - 38262 (+)
Gene ID: MGYG000004146_4_34
Type: CAZyme
Location: 38275 - 39486 (+)
Type: CAZyme
Location: 38275 - 39486 (+)
Gene ID: MGYG000004146_4_35
Type: CAZyme
Location: 39522 - 40646 (+)
Type: CAZyme
Location: 39522 - 40646 (+)
Gene ID: MGYG000004146_4_36
Type: pfam
Location: 40787 - 41989 (-)
Type: pfam
Location: 40787 - 41989 (-)
Gene ID: MGYG000004146_4_37
Type: TC
Location: 42313 - 42939 (+)
Type: TC
Location: 42313 - 42939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas sp959601025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.