Cluster: MGYG000004146_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: xylan
- Genome ID: MGYG000004146
- CGC Family ID: CGCFAM_04183
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004146_4 | MGYG000004146_4_7 | 7415 | 8515 | + | CE4 |
| CAZyme | MGYG000004146_4 | MGYG000004146_4_8 | 8814 | 10073 | - | CE20 |
| CAZyme | MGYG000004146_4 | MGYG000004146_4_9 | 10494 | 11735 | - | GH10 |
| pfam | MGYG000004146_4 | MGYG000004146_4_10 | 12250 | 13890 | + | FtsX |
| TC | MGYG000004146_4 | MGYG000004146_4_11 | 13904 | 14656 | + | 3.A.1.125.2 |
Gene ID: MGYG000004146_4_7
Type: CAZyme
Location: 7415 - 8515 (+)
Type: CAZyme
Location: 7415 - 8515 (+)
Gene ID: MGYG000004146_4_8
Type: CAZyme
Location: 8814 - 10073 (-)
Type: CAZyme
Location: 8814 - 10073 (-)
Gene ID: MGYG000004146_4_9
Type: CAZyme
Location: 10494 - 11735 (-)
Type: CAZyme
Location: 10494 - 11735 (-)
Gene ID: MGYG000004146_4_10
Type: pfam
Location: 12250 - 13890 (+)
Type: pfam
Location: 12250 - 13890 (+)
Gene ID: MGYG000004146_4_11
Type: TC
Location: 13904 - 14656 (+)
Type: TC
Location: 13904 - 14656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas sp959601025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.