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Cluster: MGYG000004146_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004146_60 MGYG000004146_60_2 400 1134 - 9.B.18.1.3
pfam MGYG000004146_60 MGYG000004146_60_3 1274 2533 - Aminotran_1_2 | DegT_DnrJ_EryC1
TC MGYG000004146_60 MGYG000004146_60_4 2872 4434 - 2.A.66.1.40
pfam MGYG000004146_60 MGYG000004146_60_5 4431 5948 - Wzy_C
CAZyme MGYG000004146_60 MGYG000004146_60_6 5991 7097 - GT4
pfam MGYG000004146_60 MGYG000004146_60_7 7134 7538 - CTP_transf_like
pfam MGYG000004146_60 MGYG000004146_60_8 7535 8377 - LicD
CAZyme MGYG000004146_60 MGYG000004146_60_9 8397 9653 - GT4
pfam MGYG000004146_60 MGYG000004146_60_10 9653 10153 - VanZ
CAZyme MGYG000004146_60 MGYG000004146_60_11 10223 11437 - GT4
CAZyme MGYG000004146_60 MGYG000004146_60_12 11727 12728 - GT2
Gene ID: MGYG000004146_60_2
Type: TC
Location: 400 - 1134 (-)
Gene ID: MGYG000004146_60_3
Type: pfam
Location: 1274 - 2533 (-)
Gene ID: MGYG000004146_60_4
Type: TC
Location: 2872 - 4434 (-)
Gene ID: MGYG000004146_60_5
Type: pfam
Location: 4431 - 5948 (-)
Gene ID: MGYG000004146_60_6
Type: CAZyme
Location: 5991 - 7097 (-)
Gene ID: MGYG000004146_60_7
Type: pfam
Location: 7134 - 7538 (-)
Gene ID: MGYG000004146_60_8
Type: pfam
Location: 7535 - 8377 (-)
Gene ID: MGYG000004146_60_9
Type: CAZyme
Location: 8397 - 9653 (-)
Gene ID: MGYG000004146_60_10
Type: pfam
Location: 9653 - 10153 (-)
Gene ID: MGYG000004146_60_11
Type: CAZyme
Location: 10223 - 11437 (-)
Gene ID: MGYG000004146_60_12
Type: CAZyme
Location: 11727 - 12728 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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