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Cluster: MGYG000004146_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004146_38 MGYG000004146_38_2 1669 2595 - 3.A.1.1.36
TC MGYG000004146_38 MGYG000004146_38_3 2616 3572 - 3.A.1.1.20
NULL(UNKNOWN) MGYG000004146_38 MGYG000004146_38_4 3768 5864 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004146_38 MGYG000004146_38_5 5921 7267 - GH16_3
TF MGYG000004146_38 MGYG000004146_38_6 7502 8971 + HTH_AraC | HTH_AraC
TF MGYG000004146_38 MGYG000004146_38_7 8952 10307 + HTH_AraC | HTH_AraC
CAZyme MGYG000004146_38 MGYG000004146_38_8 10415 12046 - GH32
CAZyme MGYG000004146_38 MGYG000004146_38_9 12099 13742 - GH32
CAZyme MGYG000004146_38 MGYG000004146_38_10 13797 15722 - GH172
STP MGYG000004146_38 MGYG000004146_38_11 15882 17429 - SBP_bac_1
CAZyme MGYG000004146_38 MGYG000004146_38_12 17718 19271 - GH32
Gene ID: MGYG000004146_38_2
Type: TC
Location: 1669 - 2595 (-)
Gene ID: MGYG000004146_38_3
Type: TC
Location: 2616 - 3572 (-)
Gene ID: MGYG000004146_38_4
Type:
Location: 3768 - 5864 (-)
Gene ID: MGYG000004146_38_5
Type: CAZyme
Location: 5921 - 7267 (-)
Gene ID: MGYG000004146_38_6
Type: TF
Location: 7502 - 8971 (+)
Gene ID: MGYG000004146_38_7
Type: TF
Location: 8952 - 10307 (+)
Gene ID: MGYG000004146_38_8
Type: CAZyme
Location: 10415 - 12046 (-)
Gene ID: MGYG000004146_38_9
Type: CAZyme
Location: 12099 - 13742 (-)
Gene ID: MGYG000004146_38_10
Type: CAZyme
Location: 13797 - 15722 (-)
Gene ID: MGYG000004146_38_11
Type: STP
Location: 15882 - 17429 (-)
Gene ID: MGYG000004146_38_12
Type: CAZyme
Location: 17718 - 19271 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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