Cluster: MGYG000004146_CGC25
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004146
- CGC Family ID: CGCFAM_00155
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004146_32 | MGYG000004146_32_1 | 2 | 589 | - | GH32 |
| CAZyme | MGYG000004146_32 | MGYG000004146_32_2 | 797 | 1912 | - | GH32 |
| NULL(UNKNOWN) | MGYG000004146_32 | MGYG000004146_32_3 | 2069 | 4003 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004146_32 | MGYG000004146_32_4 | 4073 | 5605 | - | CE20 |
| NULL(UNKNOWN) | MGYG000004146_32 | MGYG000004146_32_5 | 5805 | 6728 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000004146_32 | MGYG000004146_32_6 | 6784 | 8202 | - | SBP_bac_1 |
| TC | MGYG000004146_32 | MGYG000004146_32_7 | 8256 | 9206 | - | 3.A.1.1.11 |
| TC | MGYG000004146_32 | MGYG000004146_32_8 | 9221 | 10135 | - | 3.A.1.1.11 |
| pfam | MGYG000004146_32 | MGYG000004146_32_9 | 10132 | 12669 | - | DUF5696 |
| pfam | MGYG000004146_32 | MGYG000004146_32_10 | 12722 | 14812 | - | NHL | Yip1 |
| TC | MGYG000004146_32 | MGYG000004146_32_11 | 14882 | 15787 | - | 3.A.1.1.39 |
| TC | MGYG000004146_32 | MGYG000004146_32_12 | 15792 | 16727 | - | 3.A.1.1.23 |
Gene ID: MGYG000004146_32_1
Type: CAZyme
Location: 2 - 589 (-)
Type: CAZyme
Location: 2 - 589 (-)
Gene ID: MGYG000004146_32_2
Type: CAZyme
Location: 797 - 1912 (-)
Type: CAZyme
Location: 797 - 1912 (-)
Gene ID: MGYG000004146_32_3
Type:
Location: 2069 - 4003 (-)
Type:
Location: 2069 - 4003 (-)
Gene ID: MGYG000004146_32_4
Type: CAZyme
Location: 4073 - 5605 (-)
Type: CAZyme
Location: 4073 - 5605 (-)
Gene ID: MGYG000004146_32_5
Type:
Location: 5805 - 6728 (-)
Type:
Location: 5805 - 6728 (-)
Gene ID: MGYG000004146_32_6
Type: STP
Location: 6784 - 8202 (-)
Type: STP
Location: 6784 - 8202 (-)
Gene ID: MGYG000004146_32_7
Type: TC
Location: 8256 - 9206 (-)
Type: TC
Location: 8256 - 9206 (-)
Gene ID: MGYG000004146_32_8
Type: TC
Location: 9221 - 10135 (-)
Type: TC
Location: 9221 - 10135 (-)
Gene ID: MGYG000004146_32_9
Type: pfam
Location: 10132 - 12669 (-)
Type: pfam
Location: 10132 - 12669 (-)
Gene ID: MGYG000004146_32_10
Type: pfam
Location: 12722 - 14812 (-)
Type: pfam
Location: 12722 - 14812 (-)
Gene ID: MGYG000004146_32_11
Type: TC
Location: 14882 - 15787 (-)
Type: TC
Location: 14882 - 15787 (-)
Gene ID: MGYG000004146_32_12
Type: TC
Location: 15792 - 16727 (-)
Type: TC
Location: 15792 - 16727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas sp959601025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.