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Cluster: MGYG000004146_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004146_17 MGYG000004146_17_11 11094 13805 + GH31_7
CAZyme MGYG000004146_17 MGYG000004146_17_12 13840 15663 + GH125
CAZyme MGYG000004146_17 MGYG000004146_17_13 15698 17887 + GH65
pfam MGYG000004146_17 MGYG000004146_17_14 18022 19506 + SBP_bac_1
STP MGYG000004146_17 MGYG000004146_17_15 19675 22626 + SBP_bac_1
TC MGYG000004146_17 MGYG000004146_17_16 22619 23572 + 3.A.1.1.34
TC MGYG000004146_17 MGYG000004146_17_17 23584 24501 + 3.A.1.1.46
pfam MGYG000004146_17 MGYG000004146_17_18 24586 26652 + NHL | Yip1 | TPR_16
pfam MGYG000004146_17 MGYG000004146_17_19 26639 28918 + DUF5696
TC MGYG000004146_17 MGYG000004146_17_20 28950 29876 + 3.A.1.1.4
TC MGYG000004146_17 MGYG000004146_17_21 29833 30798 + 3.A.1.1.26
CAZyme MGYG000004146_17 MGYG000004146_17_22 30920 33700 + GH31_7
pfam MGYG000004146_17 MGYG000004146_17_23 33726 34358 + Hydrolase | HAD_2
CAZyme MGYG000004146_17 MGYG000004146_17_24 34848 38138 + CBM35 | GH31_7
CAZyme MGYG000004146_17 MGYG000004146_17_25 38327 42172 + CBM35 | CBM35 | CBM61 | GH31_10
Gene ID: MGYG000004146_17_11
Type: CAZyme
Location: 11094 - 13805 (+)
Gene ID: MGYG000004146_17_12
Type: CAZyme
Location: 13840 - 15663 (+)
Gene ID: MGYG000004146_17_13
Type: CAZyme
Location: 15698 - 17887 (+)
Gene ID: MGYG000004146_17_14
Type: pfam
Location: 18022 - 19506 (+)
Gene ID: MGYG000004146_17_15
Type: STP
Location: 19675 - 22626 (+)
Gene ID: MGYG000004146_17_16
Type: TC
Location: 22619 - 23572 (+)
Gene ID: MGYG000004146_17_17
Type: TC
Location: 23584 - 24501 (+)
Gene ID: MGYG000004146_17_18
Type: pfam
Location: 24586 - 26652 (+)
Gene ID: MGYG000004146_17_19
Type: pfam
Location: 26639 - 28918 (+)
Gene ID: MGYG000004146_17_20
Type: TC
Location: 28950 - 29876 (+)
Gene ID: MGYG000004146_17_21
Type: TC
Location: 29833 - 30798 (+)
Gene ID: MGYG000004146_17_22
Type: CAZyme
Location: 30920 - 33700 (+)
Gene ID: MGYG000004146_17_23
Type: pfam
Location: 33726 - 34358 (+)
Gene ID: MGYG000004146_17_24
Type: CAZyme
Location: 34848 - 38138 (+)
Gene ID: MGYG000004146_17_25
Type: CAZyme
Location: 38327 - 42172 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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