Cluster: MGYG000004146_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004146
- CGC Family ID: CGCFAM_06344
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004146_13 | MGYG000004146_13_20 | 17909 | 19696 | - | 3.A.1.106.3 |
| NULL(UNKNOWN) | MGYG000004146_13 | MGYG000004146_13_21 | 19817 | 20302 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000004146_13 | MGYG000004146_13_22 | 20348 | 21229 | - | S12.UPW |
| CAZyme | MGYG000004146_13 | MGYG000004146_13_23 | 21268 | 23178 | - | GH13_39 |
| TF | MGYG000004146_13 | MGYG000004146_13_24 | 23442 | 24368 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000004146_13 | MGYG000004146_13_25 | 24877 | 26469 | + | 2.A.21.2.3 |
Gene ID: MGYG000004146_13_20
Type: TC
Location: 17909 - 19696 (-)
Type: TC
Location: 17909 - 19696 (-)
Gene ID: MGYG000004146_13_21
Type:
Location: 19817 - 20302 (-)
Type:
Location: 19817 - 20302 (-)
Gene ID: MGYG000004146_13_22
Type: peptidase
Location: 20348 - 21229 (-)
Type: peptidase
Location: 20348 - 21229 (-)
Gene ID: MGYG000004146_13_23
Type: CAZyme
Location: 21268 - 23178 (-)
Type: CAZyme
Location: 21268 - 23178 (-)
Gene ID: MGYG000004146_13_24
Type: TF
Location: 23442 - 24368 (-)
Type: TF
Location: 23442 - 24368 (-)
Gene ID: MGYG000004146_13_25
Type: TC
Location: 24877 - 26469 (+)
Type: TC
Location: 24877 - 26469 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas sp959601025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.