Cluster: MGYG000004142_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004142
- CGC Family ID: CGCFAM_00357
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004142_2 | MGYG000004142_2_101 | 101476 | 102600 | + | 3.A.1.11.8 |
| TC | MGYG000004142_2 | MGYG000004142_2_102 | 102590 | 103399 | + | 3.A.1.11.8 |
| TC | MGYG000004142_2 | MGYG000004142_2_103 | 103396 | 104250 | + | 3.A.1.11.2 |
| TC | MGYG000004142_2 | MGYG000004142_2_104 | 104314 | 105381 | + | 3.A.1.11.7 |
| CAZyme | MGYG000004142_2 | MGYG000004142_2_105 | 105666 | 109019 | + | CBM54 |
Gene ID: MGYG000004142_2_101
Type: TC
Location: 101476 - 102600 (+)
Type: TC
Location: 101476 - 102600 (+)
Gene ID: MGYG000004142_2_102
Type: TC
Location: 102590 - 103399 (+)
Type: TC
Location: 102590 - 103399 (+)
Gene ID: MGYG000004142_2_103
Type: TC
Location: 103396 - 104250 (+)
Type: TC
Location: 103396 - 104250 (+)
Gene ID: MGYG000004142_2_104
Type: TC
Location: 104314 - 105381 (+)
Type: TC
Location: 104314 - 105381 (+)
Gene ID: MGYG000004142_2_105
Type: CAZyme
Location: 105666 - 109019 (+)
Type: CAZyme
Location: 105666 - 109019 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vermiculatibacterium
Species
Vermiculatibacterium sp900169975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.