Cluster: MGYG000004142_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004142
- CGC Family ID: CGCFAM_10894
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004142_19 | MGYG000004142_19_5 | 3421 | 5661 | + | GT4 |
| CAZyme | MGYG000004142_19 | MGYG000004142_19_6 | 5658 | 6743 | + | GT4 |
| TC | MGYG000004142_19 | MGYG000004142_19_7 | 6831 | 7763 | + | 2.A.20.1.4 |
| pfam | MGYG000004142_19 | MGYG000004142_19_8 | 7808 | 8491 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | MGYG000004142_19 | MGYG000004142_19_9 | 8507 | 9889 | - | 2.A.25.1.9 |
Gene ID: MGYG000004142_19_5
Type: CAZyme
Location: 3421 - 5661 (+)
Type: CAZyme
Location: 3421 - 5661 (+)
Gene ID: MGYG000004142_19_6
Type: CAZyme
Location: 5658 - 6743 (+)
Type: CAZyme
Location: 5658 - 6743 (+)
Gene ID: MGYG000004142_19_7
Type: TC
Location: 6831 - 7763 (+)
Type: TC
Location: 6831 - 7763 (+)
Gene ID: MGYG000004142_19_8
Type: pfam
Location: 7808 - 8491 (+)
Type: pfam
Location: 7808 - 8491 (+)
Gene ID: MGYG000004142_19_9
Type: TC
Location: 8507 - 9889 (-)
Type: TC
Location: 8507 - 9889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vermiculatibacterium
Species
Vermiculatibacterium sp900169975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.