Cluster: MGYG000004142_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004142
- CGC Family ID: CGCFAM_03446
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004142_8 | MGYG000004142_8_71 | 73013 | 73807 | - | 3.A.1.34.1 |
| TC | MGYG000004142_8 | MGYG000004142_8_72 | 73800 | 74744 | - | 3.A.1.34.1 |
| pfam | MGYG000004142_8 | MGYG000004142_8_73 | 74841 | 75860 | - | ABC_sub_bind |
| pfam | MGYG000004142_8 | MGYG000004142_8_74 | 76026 | 76715 | + | Asp_Glu_race |
| CAZyme | MGYG000004142_8 | MGYG000004142_8_75 | 76801 | 77529 | + | GT26 |
Gene ID: MGYG000004142_8_71
Type: TC
Location: 73013 - 73807 (-)
Type: TC
Location: 73013 - 73807 (-)
Gene ID: MGYG000004142_8_72
Type: TC
Location: 73800 - 74744 (-)
Type: TC
Location: 73800 - 74744 (-)
Gene ID: MGYG000004142_8_73
Type: pfam
Location: 74841 - 75860 (-)
Type: pfam
Location: 74841 - 75860 (-)
Gene ID: MGYG000004142_8_74
Type: pfam
Location: 76026 - 76715 (+)
Type: pfam
Location: 76026 - 76715 (+)
Gene ID: MGYG000004142_8_75
Type: CAZyme
Location: 76801 - 77529 (+)
Type: CAZyme
Location: 76801 - 77529 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vermiculatibacterium
Species
Vermiculatibacterium sp900169975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.