Cluster: MGYG000004138_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004138
- CGC Family ID: CGCFAM_05848
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004138_1 | MGYG000004138_1_714 | 859872 | 861389 | - | CE4 |
| TC | MGYG000004138_1 | MGYG000004138_1_715 | 861416 | 863110 | - | 3.A.1.32.2 |
| STP | MGYG000004138_1 | MGYG000004138_1_716 | 863391 | 866933 | + | Fer4 | Fer4 |
| TC | MGYG000004138_1 | MGYG000004138_1_717 | 867016 | 868506 | - | 2.A.66.1.32 |
| NULL(UNKNOWN) | MGYG000004138_1 | MGYG000004138_1_718 | 868533 | 868991 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004138_1 | MGYG000004138_1_719 | 869128 | 870309 | + | GT4 |
| TC | MGYG000004138_1 | MGYG000004138_1_720 | 870465 | 871337 | - | 2.A.7.3.52 |
| TC | MGYG000004138_1 | MGYG000004138_1_721 | 871337 | 872077 | - | 3.A.1.3.15 |
| TC | MGYG000004138_1 | MGYG000004138_1_722 | 872074 | 873570 | - | 3.A.1.3.14 |
| TC | MGYG000004138_1 | MGYG000004138_1_723 | 873677 | 874504 | - | 3.A.1.3.10 |
| TC | MGYG000004138_1 | MGYG000004138_1_724 | 874606 | 875373 | - | 3.A.1.3.14 |
| TC | MGYG000004138_1 | MGYG000004138_1_725 | 875393 | 876049 | - | 3.A.1.3.12 |
| TC | MGYG000004138_1 | MGYG000004138_1_726 | 876143 | 876991 | - | 3.A.1.3.10 |
Gene ID: MGYG000004138_1_714
Type: CAZyme
Location: 859872 - 861389 (-)
Type: CAZyme
Location: 859872 - 861389 (-)
Gene ID: MGYG000004138_1_715
Type: TC
Location: 861416 - 863110 (-)
Type: TC
Location: 861416 - 863110 (-)
Gene ID: MGYG000004138_1_716
Type: STP
Location: 863391 - 866933 (+)
Type: STP
Location: 863391 - 866933 (+)
Gene ID: MGYG000004138_1_717
Type: TC
Location: 867016 - 868506 (-)
Type: TC
Location: 867016 - 868506 (-)
Gene ID: MGYG000004138_1_718
Type:
Location: 868533 - 868991 (-)
Type:
Location: 868533 - 868991 (-)
Gene ID: MGYG000004138_1_719
Type: CAZyme
Location: 869128 - 870309 (+)
Type: CAZyme
Location: 869128 - 870309 (+)
Gene ID: MGYG000004138_1_720
Type: TC
Location: 870465 - 871337 (-)
Type: TC
Location: 870465 - 871337 (-)
Gene ID: MGYG000004138_1_721
Type: TC
Location: 871337 - 872077 (-)
Type: TC
Location: 871337 - 872077 (-)
Gene ID: MGYG000004138_1_722
Type: TC
Location: 872074 - 873570 (-)
Type: TC
Location: 872074 - 873570 (-)
Gene ID: MGYG000004138_1_723
Type: TC
Location: 873677 - 874504 (-)
Type: TC
Location: 873677 - 874504 (-)
Gene ID: MGYG000004138_1_724
Type: TC
Location: 874606 - 875373 (-)
Type: TC
Location: 874606 - 875373 (-)
Gene ID: MGYG000004138_1_725
Type: TC
Location: 875393 - 876049 (-)
Type: TC
Location: 875393 - 876049 (-)
Gene ID: MGYG000004138_1_726
Type: TC
Location: 876143 - 876991 (-)
Type: TC
Location: 876143 - 876991 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
QAMH01
Genus
QAMH01
Species
QAMH01 sp900544245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.