Cluster: MGYG000004133_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004133
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004133_4 | MGYG000004133_4_7 | 11913 | 12962 | + | GH177 |
| pfam | MGYG000004133_4 | MGYG000004133_4_8 | 13043 | 13510 | - | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | MGYG000004133_4 | MGYG000004133_4_9 | 13686 | 14534 | - | AP_endonuc_2 |
| CAZyme | MGYG000004133_4 | MGYG000004133_4_10 | 14550 | 15614 | - | GH179 |
| pfam | MGYG000004133_4 | MGYG000004133_4_11 | 15611 | 16462 | - | AP_endonuc_2 |
| TF | MGYG000004133_4 | MGYG000004133_4_12 | 16580 | 17374 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000004133_4 | MGYG000004133_4_13 | 17485 | 19011 | - | 2.A.25.1.4 |
| TC | MGYG000004133_4 | MGYG000004133_4_14 | 19321 | 21093 | - | 3.A.1.106.3 |
| TC | MGYG000004133_4 | MGYG000004133_4_15 | 21107 | 22834 | - | 3.A.1.106.3 |
| pfam | MGYG000004133_4 | MGYG000004133_4_16 | 23000 | 24196 | + | YfbR-like | HD_3 |
| TC | MGYG000004133_4 | MGYG000004133_4_17 | 24293 | 25963 | + | 4.C.1.1.4 |
Gene ID: MGYG000004133_4_7
Type: CAZyme
Location: 11913 - 12962 (+)
Type: CAZyme
Location: 11913 - 12962 (+)
Gene ID: MGYG000004133_4_8
Type: pfam
Location: 13043 - 13510 (-)
Type: pfam
Location: 13043 - 13510 (-)
Gene ID: MGYG000004133_4_9
Type: pfam
Location: 13686 - 14534 (-)
Type: pfam
Location: 13686 - 14534 (-)
Gene ID: MGYG000004133_4_10
Type: CAZyme
Location: 14550 - 15614 (-)
Type: CAZyme
Location: 14550 - 15614 (-)
Gene ID: MGYG000004133_4_11
Type: pfam
Location: 15611 - 16462 (-)
Type: pfam
Location: 15611 - 16462 (-)
Gene ID: MGYG000004133_4_12
Type: TF
Location: 16580 - 17374 (+)
Type: TF
Location: 16580 - 17374 (+)
Gene ID: MGYG000004133_4_13
Type: TC
Location: 17485 - 19011 (-)
Type: TC
Location: 17485 - 19011 (-)
Gene ID: MGYG000004133_4_14
Type: TC
Location: 19321 - 21093 (-)
Type: TC
Location: 19321 - 21093 (-)
Gene ID: MGYG000004133_4_15
Type: TC
Location: 21107 - 22834 (-)
Type: TC
Location: 21107 - 22834 (-)
Gene ID: MGYG000004133_4_16
Type: pfam
Location: 23000 - 24196 (+)
Type: pfam
Location: 23000 - 24196 (+)
Gene ID: MGYG000004133_4_17
Type: TC
Location: 24293 - 25963 (+)
Type: TC
Location: 24293 - 25963 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
HGM11514
Family
HGM11514
Genus
CAKSKB01
Species
CAKSKB01 sp902492655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.