Cluster: MGYG000004132_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004132
- CGC Family ID: CGCFAM_00059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004132_3 | MGYG000004132_3_83 | 94560 | 97502 | - | GH95 |
| TF | MGYG000004132_3 | MGYG000004132_3_84 | 97658 | 98485 | + | HTH_AraC | HTH_AraC |
| pfam | MGYG000004132_3 | MGYG000004132_3_85 | 98600 | 99565 | + | MTS | PrmA | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | MGYG000004132_3 | MGYG000004132_3_86 | 99546 | 100427 | - | 3.A.1.125.1 |
| TC | MGYG000004132_3 | MGYG000004132_3_87 | 100411 | 101109 | - | 3.A.1.122.6 |
Gene ID: MGYG000004132_3_83
Type: CAZyme
Location: 94560 - 97502 (-)
Type: CAZyme
Location: 94560 - 97502 (-)
Gene ID: MGYG000004132_3_84
Type: TF
Location: 97658 - 98485 (+)
Type: TF
Location: 97658 - 98485 (+)
Gene ID: MGYG000004132_3_85
Type: pfam
Location: 98600 - 99565 (+)
Type: pfam
Location: 98600 - 99565 (+)
Gene ID: MGYG000004132_3_86
Type: TC
Location: 99546 - 100427 (-)
Type: TC
Location: 99546 - 100427 (-)
Gene ID: MGYG000004132_3_87
Type: TC
Location: 100411 - 101109 (-)
Type: TC
Location: 100411 - 101109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp900760345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.