Cluster: MGYG000004132_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004132
- CGC Family ID: CGCFAM_06352
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004132_3 | MGYG000004132_3_1 | 12 | 2042 | - | GH43_35 |
| TF | MGYG000004132_3 | MGYG000004132_3_2 | 2181 | 2948 | + | HTH_AraC | HTH_AraC |
| STP | MGYG000004132_3 | MGYG000004132_3_3 | 3024 | 3821 | + | SBP_bac_3 |
| TC | MGYG000004132_3 | MGYG000004132_3_4 | 3841 | 4527 | + | 3.A.1.3.14 |
| TC | MGYG000004132_3 | MGYG000004132_3_5 | 4543 | 5319 | + | 3.A.1.3.14 |
Gene ID: MGYG000004132_3_1
Type: CAZyme
Location: 12 - 2042 (-)
Type: CAZyme
Location: 12 - 2042 (-)
Gene ID: MGYG000004132_3_2
Type: TF
Location: 2181 - 2948 (+)
Type: TF
Location: 2181 - 2948 (+)
Gene ID: MGYG000004132_3_3
Type: STP
Location: 3024 - 3821 (+)
Type: STP
Location: 3024 - 3821 (+)
Gene ID: MGYG000004132_3_4
Type: TC
Location: 3841 - 4527 (+)
Type: TC
Location: 3841 - 4527 (+)
Gene ID: MGYG000004132_3_5
Type: TC
Location: 4543 - 5319 (+)
Type: TC
Location: 4543 - 5319 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp900760345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.