Cluster: MGYG000004132_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004132
- CGC Family ID: CGCFAM_11001
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004132_37 | MGYG000004132_37_7 | 4499 | 5287 | - | 2.A.5.5.2 |
| TC | MGYG000004132_37 | MGYG000004132_37_8 | 5410 | 7167 | + | 9.B.10.1.1 |
| CAZyme | MGYG000004132_37 | MGYG000004132_37_9 | 7244 | 9808 | - | CBM91 | GH43_10 |
| CAZyme | MGYG000004132_37 | MGYG000004132_37_10 | 9830 | 12526 | - | GH43_27 |
| CAZyme | MGYG000004132_37 | MGYG000004132_37_11 | 12533 | 15004 | - | GH43_20 | GH43_26 |
| TF | MGYG000004132_37 | MGYG000004132_37_12 | 15313 | 16098 | + | HTH_AraC |
| CAZyme | MGYG000004132_37 | MGYG000004132_37_13 | 16154 | 18094 | - | CBM6 | GH43_29 |
Gene ID: MGYG000004132_37_7
Type: TC
Location: 4499 - 5287 (-)
Type: TC
Location: 4499 - 5287 (-)
Gene ID: MGYG000004132_37_8
Type: TC
Location: 5410 - 7167 (+)
Type: TC
Location: 5410 - 7167 (+)
Gene ID: MGYG000004132_37_9
Type: CAZyme
Location: 7244 - 9808 (-)
Type: CAZyme
Location: 7244 - 9808 (-)
Gene ID: MGYG000004132_37_10
Type: CAZyme
Location: 9830 - 12526 (-)
Type: CAZyme
Location: 9830 - 12526 (-)
Gene ID: MGYG000004132_37_11
Type: CAZyme
Location: 12533 - 15004 (-)
Type: CAZyme
Location: 12533 - 15004 (-)
Gene ID: MGYG000004132_37_12
Type: TF
Location: 15313 - 16098 (+)
Type: TF
Location: 15313 - 16098 (+)
Gene ID: MGYG000004132_37_13
Type: CAZyme
Location: 16154 - 18094 (-)
Type: CAZyme
Location: 16154 - 18094 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp900760345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.