Cluster: MGYG000004132_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004132
- CGC Family ID: CGCFAM_05061
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004132_36 | MGYG000004132_36_2 | 2503 | 4854 | - | CBM6 | GH43_16 |
| CAZyme | MGYG000004132_36 | MGYG000004132_36_3 | 4866 | 7226 | - | CBM6 | GH43_16 |
| peptidase | MGYG000004132_36 | MGYG000004132_36_4 | 7583 | 9112 | - | C40.UPW |
| pfam | MGYG000004132_36 | MGYG000004132_36_5 | 9296 | 10159 | + | S1 | S1_2 | S1_2 | CvfB_WH | CvfB_2nd |
| TC | MGYG000004132_36 | MGYG000004132_36_6 | 10156 | 10737 | - | 3.A.11.1.4 |
| TC | MGYG000004132_36 | MGYG000004132_36_7 | 10885 | 13113 | - | 3.A.7.16.1 |
| TC | MGYG000004132_36 | MGYG000004132_36_8 | 13106 | 14095 | - | 1.A.33.1.5 |
Gene ID: MGYG000004132_36_2
Type: CAZyme
Location: 2503 - 4854 (-)
Type: CAZyme
Location: 2503 - 4854 (-)
Gene ID: MGYG000004132_36_3
Type: CAZyme
Location: 4866 - 7226 (-)
Type: CAZyme
Location: 4866 - 7226 (-)
Gene ID: MGYG000004132_36_4
Type: peptidase
Location: 7583 - 9112 (-)
Type: peptidase
Location: 7583 - 9112 (-)
Gene ID: MGYG000004132_36_5
Type: pfam
Location: 9296 - 10159 (+)
Type: pfam
Location: 9296 - 10159 (+)
Gene ID: MGYG000004132_36_6
Type: TC
Location: 10156 - 10737 (-)
Type: TC
Location: 10156 - 10737 (-)
Gene ID: MGYG000004132_36_7
Type: TC
Location: 10885 - 13113 (-)
Type: TC
Location: 10885 - 13113 (-)
Gene ID: MGYG000004132_36_8
Type: TC
Location: 13106 - 14095 (-)
Type: TC
Location: 13106 - 14095 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp900760345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.