Cluster: MGYG000004132_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004132
- CGC Family ID: CGCFAM_11000
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004132_34 | MGYG000004132_34_8 | 11393 | 12838 | - | GH29 |
| pfam | MGYG000004132_34 | MGYG000004132_34_9 | 12909 | 13418 | - | PAP2 | PAP2_3 |
| TC | MGYG000004132_34 | MGYG000004132_34_10 | 13623 | 15278 | + | 2.A.35.2.1 |
| pfam | MGYG000004132_34 | MGYG000004132_34_11 | 15291 | 16223 | + | EamA | EamA |
| CAZyme | MGYG000004132_34 | MGYG000004132_34_12 | 16300 | 17778 | + | GH4 |
Gene ID: MGYG000004132_34_8
Type: CAZyme
Location: 11393 - 12838 (-)
Type: CAZyme
Location: 11393 - 12838 (-)
Gene ID: MGYG000004132_34_9
Type: pfam
Location: 12909 - 13418 (-)
Type: pfam
Location: 12909 - 13418 (-)
Gene ID: MGYG000004132_34_10
Type: TC
Location: 13623 - 15278 (+)
Type: TC
Location: 13623 - 15278 (+)
Gene ID: MGYG000004132_34_11
Type: pfam
Location: 15291 - 16223 (+)
Type: pfam
Location: 15291 - 16223 (+)
Gene ID: MGYG000004132_34_12
Type: CAZyme
Location: 16300 - 17778 (+)
Type: CAZyme
Location: 16300 - 17778 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp900760345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.