Cluster: MGYG000004132_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004132
- CGC Family ID: CGCFAM_00385
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004132_1 | MGYG000004132_1_47 | 63005 | 63901 | - | CE4 |
| TC | MGYG000004132_1 | MGYG000004132_1_48 | 64088 | 66331 | + | 2.A.6.4.2 |
| TF | MGYG000004132_1 | MGYG000004132_1_49 | 66766 | 67791 | + | 0043758 |
| pfam | MGYG000004132_1 | MGYG000004132_1_50 | 67818 | 68486 | + | GrpE |
| TC | MGYG000004132_1 | MGYG000004132_1_51 | 68517 | 70373 | + | 1.A.33.1.4 |
Gene ID: MGYG000004132_1_47
Type: CAZyme
Location: 63005 - 63901 (-)
Type: CAZyme
Location: 63005 - 63901 (-)
Gene ID: MGYG000004132_1_48
Type: TC
Location: 64088 - 66331 (+)
Type: TC
Location: 64088 - 66331 (+)
Gene ID: MGYG000004132_1_49
Type: TF
Location: 66766 - 67791 (+)
Type: TF
Location: 66766 - 67791 (+)
Gene ID: MGYG000004132_1_50
Type: pfam
Location: 67818 - 68486 (+)
Type: pfam
Location: 67818 - 68486 (+)
Gene ID: MGYG000004132_1_51
Type: TC
Location: 68517 - 70373 (+)
Type: TC
Location: 68517 - 70373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp900760345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.