Cluster: MGYG000004132_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004132
- CGC Family ID: CGCFAM_06301
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004132_1 | MGYG000004132_1_19 | 30913 | 31977 | + | 3.A.1.2.25 |
| TC | MGYG000004132_1 | MGYG000004132_1_20 | 32107 | 33618 | + | 3.A.1.2.23 |
| TC | MGYG000004132_1 | MGYG000004132_1_21 | 33618 | 34733 | + | 3.A.1.2.25 |
| TC | MGYG000004132_1 | MGYG000004132_1_22 | 34735 | 35781 | + | 3.A.1.2.14 |
| pfam | MGYG000004132_1 | MGYG000004132_1_23 | 36124 | 37344 | + | CBM_4_9 | LRR_5 |
| CAZyme | MGYG000004132_1 | MGYG000004132_1_24 | 37407 | 39557 | + | CBM91 | GH43_10 |
| CAZyme | MGYG000004132_1 | MGYG000004132_1_25 | 39682 | 41154 | + | GH43_16 |
Gene ID: MGYG000004132_1_19
Type: TC
Location: 30913 - 31977 (+)
Type: TC
Location: 30913 - 31977 (+)
Gene ID: MGYG000004132_1_20
Type: TC
Location: 32107 - 33618 (+)
Type: TC
Location: 32107 - 33618 (+)
Gene ID: MGYG000004132_1_21
Type: TC
Location: 33618 - 34733 (+)
Type: TC
Location: 33618 - 34733 (+)
Gene ID: MGYG000004132_1_22
Type: TC
Location: 34735 - 35781 (+)
Type: TC
Location: 34735 - 35781 (+)
Gene ID: MGYG000004132_1_23
Type: pfam
Location: 36124 - 37344 (+)
Type: pfam
Location: 36124 - 37344 (+)
Gene ID: MGYG000004132_1_24
Type: CAZyme
Location: 37407 - 39557 (+)
Type: CAZyme
Location: 37407 - 39557 (+)
Gene ID: MGYG000004132_1_25
Type: CAZyme
Location: 39682 - 41154 (+)
Type: CAZyme
Location: 39682 - 41154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp900760345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.